Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02489 ATGAAGACCTCAAATCTTGTGTTCATCTTGACCATTATCTCATTATGCAGCATTTGCTTCGCACAGAACTCCCCAAAAGACTTCCTCGATGCGCACAATGAAGCTCGTAAAGAGGTTGGTGTTAAACCATTAACATGGAACGAAACCCTTGTAGAATATGCTCAGAAATACGTGGACTCAAAGAAAAAAGACTGCGAATTTGAGCATTCTATGGGACCTTATGGGGAGAACTTGGCCCAGGGTTTTGAGGAATTATCTGGCGTGGACTCGGTGAAAATGTGGCTATCAGAGAAGGAATTCTATGATCACAAGAACAACAAATGTGTTAAGGATGAGTGCTTGCATTACACTCAGTGTGTTTGGAACAACACGGAGAGTGTTGGGTGTGCTAGAACCAAATGTGACAATAATTGGATGTTTGTCATCTGCAGCTATTACCCTGTAGGCAATATTGTAGGGTTACCAGCTTACTAA 474 0.4198 MKTSNLVFILTIISLCSICFAQNSPKDFLDAHNEARKEVGVKPLTWNETLVEYAQKYVDSKKKDCEFEHSMGPYGENLAQGFEELSGVDSVKMWLSEKEFYDHKNNKCVKDECLHYTQCVWNNTESVGCARTKCDNNWMFVICSYYPVGNIVGLPAY 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02489 157 Pfam Cysteine-rich secretory protein family 29 145 IPR014044 -
Phco4g02489 157 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 27 153 IPR001283 -
Phco4g02489 157 Gene3D CAP 22 157 IPR035940 -
Phco4g02489 157 SUPERFAMILY PR-1-like 22 157 IPR035940 -
Phco4g02489 157 ProSitePatterns CRISP family signature 2. 140 151 IPR018244 GO:0005576
Phco4g02489 157 FunFam CAP, cysteine-rich secretory protein, antigen 5 22 157 - -
Phco4g02489 157 SMART SCP_3 23 153 IPR014044 -
Phco4g02489 157 CDD CAP_PR-1 25 157 - -
Phco4g02489 157 PRINTS Allergen V5/Tpx-1 family signature 90 103 IPR001283 -
Phco4g02489 157 PRINTS Allergen V5/Tpx-1 family signature 140 153 IPR001283 -
Phco4g02489 157 PRINTS Allergen V5/Tpx-1 family signature 44 62 IPR001283 -
Phco4g02489 157 PRINTS Allergen V5/Tpx-1 family signature 113 129 IPR001283 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02489 Phco-Chr4 46078168 46078641 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g02489 4 46078168 46078641 Phco4g02489 4 46078168 46078641 ECH
Phco4g02489 4 46078168 46078641 Phco11g00277 11 1822412 1822978 PCT