Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02483 ATGGCGGTGGAGTACGCATGCTGCACGTCGGAGTTCTTCGTTCGCATACTCGTGATCGTGCTGCTTGTGTTGTTCGCGGGCCTCATGTCGGGCCTCACGTTGGGCCTCATGTCCCTCAGCCTTGTTGATCTCGAGGTCCTCGCTAAGTCCGGTACTCCTCAAGATCGCAATCACGCTGCGAAGATATTACCAGTTGTCAAAAACCAACATTTATTGCTTTGTACACTGCTAATTTGCAATGCTGCAGCCATGGAGGCACTTCCTATTTTTCTCGACAGTCTTGTTACTGCGTGGGGAGCTATCCTTATTTCGGTGACATTAATTCTTTTGTTCGGTGAGATTATACCCCAATCAGTTTGTTCTCGGTATGGTTTGGCCATTGGTGCATCAGTGGTTCCCTTTGTCCGGGTGCTTGTATGTGTGTGCTTTCCGGTTGCCTTTCCAATTAGTAAGTTGTTGGACTTTTTGCTAGGCCATCGACATGAGGCCTTATTTCGTAGAGCTGAGTTGAAGACACTTGTAAATTTGCATGGTAATGAGGCTGGAAAAGGTGGGGAACTGACACATGATGAAACAACTATCATTGCTGGGGCACTTGAACTCAGCGAGAAGACAGCCAGTGATGCCATGACTCCTATAGATGAAACATTTGCTGTTGATATTAATTCAAAGCTTGATAGGGAACTGATGAATGAAATATTGGAGAAAGGGCATAGCAGAGTCCCAGTCTTCTATGAGCAGTCTACAAACATTATAGGACTTATACTGGTGAAGAATTTATTGACTGTTCATCCAGAAGATGAAGCATCCGTGAAGAGTGTAACTATACGCAGGATTCCAAGGGTTCCAGAAAGTATGCCACTTTATGACATTTTAAATGAATTCCAGAAGGGCCATAGCCACATGGCAGTTGTTGTGAGACGGTGTGACAAGATGGAGGAACAATCTTCCCAAAATAATGCAGACGACTCGGTGAGAGATGTGAAGGTGGATATTGATGGTGAAAAGCCTCCCAAGGAGAAAACTTTGAAACCCAAGTTGCCGCTCCATAAGTGGAAAAGCTTCCCAAATACAAACATGTCAAATAGGGGTGGCTCTCGGAGCAGAAAATGGTCAAAAAATATGTACTCGGATATTTTGGAGATAGATGGAAGTCCCCTTCCTAAGCTCCCTGAAGAAGAAGAAGCTGTTGGAATTATTACAATGGAAGATGTTATTGAAGAGCTTCTACAGGAGGAGATCTTTGATGAGACAGATCATCATTTTGAAGACTCGTGA 1278 0.4437 MAVEYACCTSEFFVRILVIVLLVLFAGLMSGLTLGLMSLSLVDLEVLAKSGTPQDRNHAAKILPVVKNQHLLLCTLLICNAAAMEALPIFLDSLVTAWGAILISVTLILLFGEIIPQSVCSRYGLAIGASVVPFVRVLVCVCFPVAFPISKLLDFLLGHRHEALFRRAELKTLVNLHGNEAGKGGELTHDETTIIAGALELSEKTASDAMTPIDETFAVDINSKLDRELMNEILEKGHSRVPVFYEQSTNIIGLILVKNLLTVHPEDEASVKSVTIRRIPRVPESMPLYDILNEFQKGHSHMAVVVRRCDKMEEQSSQNNADDSVRDVKVDIDGEKPPKEKTLKPKLPLHKWKSFPNTNMSNRGGSRSRKWSKNMYSDILEIDGSPLPKLPEEEEAVGIITMEDVIEELLQEEIFDETDHHFEDS 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02483 425 ProSiteProfiles CBS domain profile. 210 270 IPR000644 -
Phco4g02483 425 Pfam Cyclin M transmembrane N-terminal domain 17 190 IPR002550 -
Phco4g02483 425 Gene3D - 191 325 IPR046342 -
Phco4g02483 425 FunFam DUF21 domain-containing protein 189 324 - -
Phco4g02483 425 MobiDBLite consensus disorder prediction 350 370 - -
Phco4g02483 425 CDD CBS_pair_CorC_HlyC_assoc 205 306 IPR044751 -
Phco4g02483 425 PANTHER METAL TRANSPORTER CNNM 3 422 IPR045095 GO:0010960
Phco4g02483 425 SUPERFAMILY CBS-domain pair 194 411 IPR046342 -
Phco4g02483 425 ProSiteProfiles CNNM transmembrane domain profile. 8 191 IPR002550 -
Phco4g02483 425 MobiDBLite consensus disorder prediction 354 370 - -
Phco4g02483 425 Gene3D - 381 417 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02483 Phco-Chr4 46016314 46021430 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g02483 4 46016314 46021430 Phco4g02483 4 46016314 46021430 ECH
Phco4g02483 4 46016314 46021430 Phco11g00275 11 1805986 1809004 PCT