Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g00275 ATGGCGGTGGAATACAAGTGCTGTGAAACTCAGTTTTTCATACGGTTACTGATAATTGTGCTGCTTGTGCTGTTTGCTGGATTGATGTCAGGGCTCACTTTAGGACTCATGTCCTTGAGTCTTGTTGATCTTGAGGTTCTTGCTAAGTCTGGCACCCCTCAGGATCGCAAACATGCCGCGAAGATATTGCCTGTTGTCAGAAATCAACATTTGTTGCTTTGCACCCTTCTAATTTGCAACGCTGCAGCCATGGAGGCACTTCCTATCTTTCTTGATAGTCTAGTTGTTGCATGGGGTGCTGTCCTGATTTCAGTAACATTAATTCTCCTGTTTGGTGAGATTATACCACAATCAATTTGTTCTCGGTATGGTTTAGCAATTGGTGCAACAGTGGCTCCAGTTGTCAGTGTCCTTGTATGGATGTGTTTTCCTGTTGCCTATCCAATTAGCAAGTTGTTGGACTATTTGCTTGGGCATCGACATGAAGCACTTTTCCGTAGAGCTGAGTTGAAAACACTTGTAAATCTGCATGGAAATGAGGCTGGGAAAGGTGGAGAACTGACACATGATGAAACAACAATCATTGCTGGAGCACTTGAACTCACTGAGAAGACAGCCAGTGATGCCATGACTCCCATAACTGAAATATTTTCTGTTGATATTAATTCAAAGCTTGACAGGGAATTGATGAATCTAATATTGGAGAAAGGGCATAGCAGAGTCCCTGTCTACTACGAGGAGACTGCAAACATTATTGGACTTATCTTGGTCAAGAATTTACTGAGAATTGACCCAGAAGAAGGGTTACCGGTGAAAAGTGTGACCATAAGGAGAATCCCAAGGGTTCCAGAAACGATGCCACTGTATGATATTTTGAACGAGTTCCAGAAGGGCCATAGCCACATGGCTGTTGTTATCAGACACACTGACAAGACAGGTCAACACTCGTCCAACAATCATGCCAATGTGAGAGATGTGAAGGTAGATATTGATGGGGGGAAGACCACCCCAGAGAATAATAATATGTTGAAAAGCAAGAGGTCACTCCAAAAGTGGAAGAGCTTTCCAAACTCAAATAATTCCAACAGGGGTGGCTCCAGGAGCAGAAAATGCTCAAAAAATATGTACTCAGATATTTTGGAAATAGATGGAAATACACTTCCAACGCTGCCAGAAAAAGAAGAAGCTGTTGGAATTATTACCATGGAAGATGTCATTGAAGAGCTTTTACAGGAGGAGATCTTTGATGAGACCGATCATCACTTTGAAGACTCATGA 1278 0.4249 MAVEYKCCETQFFIRLLIIVLLVLFAGLMSGLTLGLMSLSLVDLEVLAKSGTPQDRKHAAKILPVVRNQHLLLCTLLICNAAAMEALPIFLDSLVVAWGAVLISVTLILLFGEIIPQSICSRYGLAIGATVAPVVSVLVWMCFPVAYPISKLLDYLLGHRHEALFRRAELKTLVNLHGNEAGKGGELTHDETTIIAGALELTEKTASDAMTPITEIFSVDINSKLDRELMNLILEKGHSRVPVYYEETANIIGLILVKNLLRIDPEEGLPVKSVTIRRIPRVPETMPLYDILNEFQKGHSHMAVVIRHTDKTGQHSSNNHANVRDVKVDIDGGKTTPENNNMLKSKRSLQKWKSFPNSNNSNRGGSRSRKCSKNMYSDILEIDGNTLPTLPEKEEAVGIITMEDVIEELLQEEIFDETDHHFEDS 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g00275 425 PANTHER METAL TRANSPORTER CNNM 3 422 IPR045095 GO:0010960
Phco11g00275 425 Pfam Cyclin M transmembrane N-terminal domain 17 190 IPR002550 -
Phco11g00275 425 MobiDBLite consensus disorder prediction 329 371 - -
Phco11g00275 425 ProSiteProfiles CBS domain profile. 210 271 IPR000644 -
Phco11g00275 425 CDD CBS_pair_CorC_HlyC_assoc 205 306 IPR044751 -
Phco11g00275 425 FunFam DUF21 domain-containing protein 189 324 - -
Phco11g00275 425 Pfam CBS domain 215 263 IPR000644 -
Phco11g00275 425 Gene3D - 189 324 IPR046342 -
Phco11g00275 425 Gene3D - 377 417 IPR046342 -
Phco11g00275 425 ProSiteProfiles CNNM transmembrane domain profile. 8 191 IPR002550 -
Phco11g00275 425 MobiDBLite consensus disorder prediction 334 371 - -
Phco11g00275 425 SUPERFAMILY CBS-domain pair 194 411 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g00275 Phco-Chr11 1805986 1809004 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g00275 11 1805986 1809004 Phco11g00275 11 1805986 1809004 ECH
Phco4g02483 4 46016314 46021430 Phco11g00275 11 1805986 1809004 PCT