Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02470 ATGGAGAACTACCAGTACCCGTCCTACCCTGACTCCGGCGACTCCTCCCCGCGCTCCAGGGAGATCGACTTCGAGAACCCGCCGCCTTGGGACGACCAGCAGACCCAGAACTACAAGGCCAAGTTCATGTGCAGTTACGGCGGCAAGATCCAGCCCCGAACCCACGACAACCAGCTCTCCTACGTCGGCGGCGACACCAAGATCCTCGCCGTCGACCGCGCCATCAAGTTTCCCGCCTTCCTTTCCAAGCTCTCCTCGCTCTGCGGCGCCACGCCGCAAGACCTCACCTTCAAGTATCAACTCCCCGGCGAGGATCTCGACGCCCTAATCTCCGTCACCAACGACGACGACCTGGAACACATGATGCACGAGTACGACCGTCTCTATCGCCCTAACTCCAAACCCGTCAGGATGAGACTCTTCCTCTTCACGCTTTCCTCAAACCCTAATTCCTCTTTCTCCTCCGATCGCGATCGCTTCGTAGATGCCCTTAACTCTGCTCCAATTCCTCCGCAACCCGACCCCATCAAAACCCCACCCGTTACTCCTTCTAATGTCGATTACCTCTTCGGTCTCGACAAGGCCGTTGCTCCTCCCACTCTACCTCCTTCCTTCGCCGCCGTTAAGTTTCACGATCCCGCACCGGAGCCTGTTGCGCCGCAGCCGGAGTATCAGGTCCGCGGTGGAATCTCCGTTTCTGATCGCGTCGTCGGATCGGATCCGAGTGCGAACTCGATCGAGATTCAGAGACAGTTGCAGCAGGAGATGCAGCGTTTGCAGGTTGCTGAGAATGAATATCGGAGGAGGAGTGAGGATGGTTTCGCCGGTGGCTATGCCGCTGCGGGAGGGGATTACTACATGCAGAAGATGCCGGAGAAGGCCCCGCCGGTTAATGCGCCCCATCCCGCCGGGTACTGGCCGGAGAAGCAGTTTTCTGGCGAGGGCTTTCAGACGACGGTCACGACGGCTCCCGGAGGTGCTGATCAGCAGGTTTATGTTATCCCAGCGCCGGGGACGTTCTACCACGCACCGGTGGTGAGGCCTCCGGCGGCGCAGGGCTACTACGCGGTGCAGAGAATGGGGTCCGACGGTTTCCGTGAGCAGGCGGTGTACGGCGGCGTATCTCAGCAGAAGACTGCGTTTTCGTCGGCGGGTTCGACGCAGCCGGTTAAGGCTTCGGGGTATGCTGAGGGATACGGCGTTGTGAGGCCTAGTGGGGTGCCGGATAATGCGGCGTACACGCAGTTGGCGTATGATAGTGCAAGTGGGAGGCAGGTCTACTATACTGCGCAGGGAGGGGTGGTGGGGGTTCCGCCGCAGTACCAAGGGGTTCCGCCGGTGGTGGGGTCGGATGTGAGGCCGGTTGGGGTTTCGGTGGGCCAGGATGTTAAGGTGGTTAACAAGGTTAACCAAGGTTCTGTGTGA 1425 0.5993 MENYQYPSYPDSGDSSPRSREIDFENPPPWDDQQTQNYKAKFMCSYGGKIQPRTHDNQLSYVGGDTKILAVDRAIKFPAFLSKLSSLCGATPQDLTFKYQLPGEDLDALISVTNDDDLEHMMHEYDRLYRPNSKPVRMRLFLFTLSSNPNSSFSSDRDRFVDALNSAPIPPQPDPIKTPPVTPSNVDYLFGLDKAVAPPTLPPSFAAVKFHDPAPEPVAPQPEYQVRGGISVSDRVVGSDPSANSIEIQRQLQQEMQRLQVAENEYRRRSEDGFAGGYAAAGGDYYMQKMPEKAPPVNAPHPAGYWPEKQFSGEGFQTTVTTAPGGADQQVYVIPAPGTFYHAPVVRPPAAQGYYAVQRMGSDGFREQAVYGGVSQQKTAFSSAGSTQPVKASGYAEGYGVVRPSGVPDNAAYTQLAYDSASGRQVYYTAQGGVVGVPPQYQGVPPVVGSDVRPVGVSVGQDVKVVNKVNQGSV 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02470 474 Coils Coil 245 272 - -
Phco4g02470 474 MobiDBLite consensus disorder prediction 1 15 - -
Phco4g02470 474 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 59 145 - -
Phco4g02470 474 CDD PB1_UP2 43 143 - -
Phco4g02470 474 MobiDBLite consensus disorder prediction 1 33 - -
Phco4g02470 474 SUPERFAMILY CAD & PB1 domains 55 153 - -
Phco4g02470 474 Pfam PB1 domain 55 143 IPR000270 GO:0005515
Phco4g02470 474 PANTHER OS05G0427100 PROTEIN-RELATED 9 353 - -
Phco4g02470 474 Gene3D - 60 144 - -
Phco4g02470 474 SMART PB1_new 54 145 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02470 Phco-Chr4 45862777 45864201 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g02470 4 45862777 45864201 Phco11g00260 11 1699889 1701241 PCT