Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g00260 ATGGAGAATTATTCATACCAATCATACCCTGAGTCTGGCGACTCCTCTCCACGCTCCAGAGAGATCGACTTTGACAACCCTCCTCCTCCATGGGACGAACAACAGCAACAGAATTACAAGGTAAAGTTCATGTGCAGCTACGGCGGAAAGATCCACCCACGCTCCCACGACAACCAACTGTCATACGTCGGCGGCGAGACCAAGATCCTCGCCGTGGATCGCTCCATAAAGTTTGGCGTCCTGCTGGCCAAGCTCTCTGCCCTCTGCGAGCTGGCGCCACAAGAAAGCAACAACAGCAGCCTCATCTTCAAGTACCAGCTCCCGGGCGAAGACCTCGACGCTCTCATCTCCGTCACCAACGACGACGACCTCGACCACATGATGCACGAGTACGATCGCCTCTACCGCGCTTCCGCTAGACCCGCCCGCATGCGATTATTCCTCTTTGTCGCCGATACTCTTCCTACTCCGCTTCCTGCTTCCACACCGCTCCAACCTGTACTTAAACCAAATAATGTCGATTTCCTCTTCGGTCTCGAGAAGGGCGCTGGTGTCGCCGTCGCGCCTCCGCCGTCTCAGATTCCGCCTGCGGCAGTCAAATTTCATGATCCGGTGCCGGAGCCCGTCGCGCCCCCGCCGGAGTACCAGTCGCGGTTGAACGTGAACCTTGTCGATAGGGTTTCGGCTTCTGATCCGAGCGCGATTCGGCGCCAGTTGCAGCAATTGCAAATTGCGGAGAGCGAGCAAGGCGCGTATCGGAGGAAGAGCGAGGAGAATTACCCCGCGGGTGATTATTACGTTCAGAAGCTGCCTGAGAAGTTTCCTCCGGCGAATTTACCGACCAGCGCCCCGGGTTATTGGCCGGAAAAGCATGTTTCCGGCGAATCCTATCAGCCGGCTGCGTCCGGTGGAGGAGATGCGCCGGTTTACATGATTTCGGCGCCGGGGACGTACTATCATGCCCCGGTGGTGCGGCCTCCAGCCACCCAGGGGTACTACGCGGTGCAGCGAATGGCTTCAGATGGTTACCGTGAAGCGGCGGTGTACGGTGGTATGACGCCTCAGGCTACCTTGGCGCCAGGGCAGCAACCGGTTAAGGCTCCCGCGTATACGGAAGGATTCGGTGTGGTGCGGCCAAGTGGGATAGTGGATAATACCGGTGCTCCGTACGCACAGGTAGCGTACGATAGTGCAAGTGGGAGACAGGTTTATTATACTGCACAGGGTGGCGTAGTGCACGCTCCTCCGTACCAAGGCGTTTTTCCACCGGTCACTTCTGATATGAGACAAACTGCGGTGACGTTGGGTCAAGATGTTAAAGTGATGAACAAAGTTACTCAAGGTTCTGTCTGA 1353 0.5691 MENYSYQSYPESGDSSPRSREIDFDNPPPPWDEQQQQNYKVKFMCSYGGKIHPRSHDNQLSYVGGETKILAVDRSIKFGVLLAKLSALCELAPQESNNSSLIFKYQLPGEDLDALISVTNDDDLDHMMHEYDRLYRASARPARMRLFLFVADTLPTPLPASTPLQPVLKPNNVDFLFGLEKGAGVAVAPPPSQIPPAAVKFHDPVPEPVAPPPEYQSRLNVNLVDRVSASDPSAIRRQLQQLQIAESEQGAYRRKSEENYPAGDYYVQKLPEKFPPANLPTSAPGYWPEKHVSGESYQPAASGGGDAPVYMISAPGTYYHAPVVRPPATQGYYAVQRMASDGYREAAVYGGMTPQATLAPGQQPVKAPAYTEGFGVVRPSGIVDNTGAPYAQVAYDSASGRQVYYTAQGGVVHAPPYQGVFPPVTSDMRQTAVTLGQDVKVMNKVTQGSV 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g00260 450 PANTHER OS05G0427100 PROTEIN-RELATED 9 332 - -
Phco11g00260 450 Pfam PB1 domain 56 150 IPR000270 GO:0005515
Phco11g00260 450 MobiDBLite consensus disorder prediction 1 15 - -
Phco11g00260 450 SUPERFAMILY CAD & PB1 domains 56 153 - -
Phco11g00260 450 Gene3D - 61 151 - -
Phco11g00260 450 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 60 151 - -
Phco11g00260 450 SMART PB1_new 55 151 IPR000270 GO:0005515
Phco11g00260 450 MobiDBLite consensus disorder prediction 1 35 - -
Phco11g00260 450 CDD PB1_UP2 44 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g00260 Phco-Chr11 1699889 1701241 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g00260 11 1699889 1701241 Phco11g00260 11 1699889 1701241 ECH
Phco4g02470 4 45862777 45864201 Phco11g00260 11 1699889 1701241 PCT