Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02469 ATGGCCGCCGCCACCGCCTTGCTCCGTTCTCTCCGCCGCCGAGAATTTCCTACTTCCTCTCTCTCCTCCTTTCGATCGTTCACGAGCGGCACAAGGACATCATATGTTGGTCACAAGTGGGCTAGTTTGTCTCGACCATTCAGTTCAAAGCCTGCTGGTAATGATGTCATTGGAATTGATCTTGGTACTACCAATTCATGCGTTTCTGTTATGGAGGGAAAGAATCCTAAAGTCATTGAAAATTCTGAAGGAGCTCGAACAACACCATCAGTGGTTGCCTTTAACCAGAAAGCGGAACTTCTTGTTGGTACACCTGCCAAGCGTCAGGCTGTGACTAACCCTACAAACACACTTTTTGGAACCAAGCGAATGATAGGTAGGCGGTTTGATGATCCTCAAACTCAGAAGGAGATGAAGATGGTACCATTCAAGATTGTTAAGGCACCTAATGGAGATGCTTGGGTTGAAGCCAATGGGCAGCAGTACTCTCCCAGCCAAATTGGTGCTTTTGTTCTCACCAAGATGAAGGAAACTGCTGAATCATATCTTGGAAAGTCGGTTTCAAAAGCTGTAATTACTGTACCAGCTTACTTCAATGATGCGCAAAGGCAGGCAACAAAAGATGCTGGCAAAATTGCTGGTCTTGATGTCCAGAGAATCATCAATGAGCCCACTGCTGCTGCACTTTCATATGGGATGAACAACAAGGAGGGTCTCATTGCAGTTTTTGATCTTGGGGGTGGAACTTTTGATGTGTCCATCTTAGAGATTTCTAGTGGTGTTTTTGAGGTGAAAGCAACAAATGGTGACACTTTCTTGGGAGGAGAGGATTTTGATAATGCTTTATTGGACTTTCTAGTGAACGAATTCAAAAGATCTGAGAGTATTGACCTTTCAAAGGATAAGCTTGCCTTGCAGAGGCTTCGGGAAGCTGCTGAGAAAGCAAAAATAGAACTATCTTCAACATCTCAGACAGAAATCAATCTTCCTTTCATCACTGCTGATGCATCTGGTGCAAAACATCTGAATATCACATTGACAAGATCCAAGTTTGAGGCTTTAGTAAACCACTTGATTGAAAGGACAAAGGCACCGTGTAAAAGCTGCTTGAAGGATGCTAACATATCTATCAAGGATGTTGATGAGGTTCTCCTTGTTGGAGGGATGACCCGAGTGCCTAAAGTCCAGGAGGTGGTTTCAGAGATCTTTGGAAAGAGTCCTAGCAAAGGAGTAAATCCTGATGAGGCAGTTGCCATGGGAGCGGCTATTCAAGGTGGTATTTTACGCGGAGATGTTAAAGAGCTATTACTCCTCGATGTCACTCCACTTTCTCTGGGCATTGAGACTTTAGGTGGTATATTTACCAGGTTGATCAATCGTAACACCACAATTCCTACGAAAAAAAGCCAGGTGTTTTCAACCGCAGCTGACAATCAGACTCAGGTTGGTATCAAGGTTCTACAAGGTGAGCGAGAAATGGCTACAGACAACAAAATGCTTGGAGAATTTGAGCTTGTTGGCATTCCTCCATCCCCAAGAGGTATCCCTCAGATTGAAGTCACATTTGACATAGACGCCAACGGAATTGTTACTGTCTCTGCCAAAGACAAATCCACTGGGAAAGAACAGCAAATCACCATCCGATCATCTGGAGGACTCTCAGAAGATGAGATCGATAAGATGGTCAGAGAAGCAGAGTTGCATGCTCAAAGAGACCAAGAAAGAAAGGCTCTCATTGACATTAGAAACAGTGCAGATACAACCATCTACAGCATTGAGAAGAGTTTAGGTGAGTACAGAGAGAAGATTCCCAGTGAAGTGGCCAAAGAGATTGAAGATGCAGTATCAGATTTGAGAACTGCGATGGCAGGGGAGAATGCTGATGTAATTAAGGAAAAGCTTGATGCAGCGAACAAAGCTGTCTCCAAGATTGGACAGCACATGTCAGGTGGTTCTAGTGGTGGTTCCTCCACTGGAGGTTCTCAGGGTGGTGACCAGGCTCCCGAGGCGGAGTATGAAGAAGTCAAGAAGTGA 2034 0.4474 MAAATALLRSLRRREFPTSSLSSFRSFTSGTRTSYVGHKWASLSRPFSSKPAGNDVIGIDLGTTNSCVSVMEGKNPKVIENSEGARTTPSVVAFNQKAELLVGTPAKRQAVTNPTNTLFGTKRMIGRRFDDPQTQKEMKMVPFKIVKAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAESYLGKSVSKAVITVPAYFNDAQRQATKDAGKIAGLDVQRIINEPTAAALSYGMNNKEGLIAVFDLGGGTFDVSILEISSGVFEVKATNGDTFLGGEDFDNALLDFLVNEFKRSESIDLSKDKLALQRLREAAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSKFEALVNHLIERTKAPCKSCLKDANISIKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVAMGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMATDNKMLGEFELVGIPPSPRGIPQIEVTFDIDANGIVTVSAKDKSTGKEQQITIRSSGGLSEDEIDKMVREAELHAQRDQERKALIDIRNSADTTIYSIEKSLGEYREKIPSEVAKEIEDAVSDLRTAMAGENADVIKEKLDAANKAVSKIGQHMSGGSSGGSSTGGSQGGDQAPEAEYEEVKK 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02469 677 Hamap Chaperone protein DnaK [dnaK]. 53 675 IPR012725 GO:0005524|GO:0006457|GO:0051082
Phco4g02469 677 Gene3D - 232 412 - -
Phco4g02469 677 Gene3D - 553 650 IPR029048 -
Phco4g02469 677 PANTHER HEAT SHOCK PROTEIN 70KDA 56 613 IPR013126 GO:0005524|GO:0140662
Phco4g02469 677 ProSitePatterns Heat shock hsp70 proteins family signature 3. 383 397 IPR018181 -
Phco4g02469 677 FunFam Heat shock protein 9 119 170 - -
Phco4g02469 677 Gene3D Actin; Chain A, domain 4 275 362 - -
Phco4g02469 677 PRINTS 70kDa heat shock protein signature 515 531 - -
Phco4g02469 677 PRINTS 70kDa heat shock protein signature 411 431 - -
Phco4g02469 677 PRINTS 70kDa heat shock protein signature 106 114 - -
Phco4g02469 677 PRINTS 70kDa heat shock protein signature 55 68 - -
Phco4g02469 677 PRINTS 70kDa heat shock protein signature 434 453 - -
Phco4g02469 677 PRINTS 70kDa heat shock protein signature 190 210 - -
Phco4g02469 677 PRINTS 70kDa heat shock protein signature 380 396 - -
Phco4g02469 677 PRINTS 70kDa heat shock protein signature 83 95 - -
Phco4g02469 677 PRINTS 70kDa heat shock protein signature 248 258 - -
Phco4g02469 677 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 428 552 IPR029047 -
Phco4g02469 677 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 430 586 IPR029047 -
Phco4g02469 677 FunFam Molecular chaperone DnaK 553 653 - -
Phco4g02469 677 ProSitePatterns Heat shock hsp70 proteins family signature 2. 242 255 IPR018181 -
Phco4g02469 677 Pfam Hsp70 protein 56 648 IPR013126 GO:0005524|GO:0140662
Phco4g02469 677 SUPERFAMILY Actin-like ATPase domain 56 236 IPR043129 -
Phco4g02469 677 FunFam Molecular chaperone DnaK 275 362 - -
Phco4g02469 677 SUPERFAMILY Actin-like ATPase domain 237 428 IPR043129 -
Phco4g02469 677 FunFam Chaperone protein DnaK HSP70 424 607 - -
Phco4g02469 677 ProSitePatterns Heat shock hsp70 proteins family signature 1. 59 66 IPR018181 -
Phco4g02469 677 FunFam Chaperone protein HscA homolog 239 296 - -
Phco4g02469 677 CDD HSPA9-like_NBD 53 428 - -
Phco4g02469 677 FunFam Molecular chaperone DnaK 57 238 - -
Phco4g02469 677 Coils Coil 298 325 - -
Phco4g02469 677 NCBIfam molecular chaperone DnaK 56 648 IPR012725 GO:0005524|GO:0006457|GO:0051082
Phco4g02469 677 Gene3D - 57 425 - -
Phco4g02469 677 MobiDBLite consensus disorder prediction 641 677 - -
Phco4g02469 677 MobiDBLite consensus disorder prediction 645 664 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02469 Phco-Chr4 45849051 45852244 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g02469 4 45849051 45852244 Phco11g00254 11 1661496 1664767 PCT