Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g00254 ATGGCTGCCGTGCTCCGCTCTCTCCGCCGCCGCGATGTCGCCTCCGCCACCTTCTCTGCCTATCGCTCGTTGACGGGAAGCACTAAGCCAGCATATGTAGCTCAAAAGTGGTCTTGTTTGGCTCGACCATTCAGTTCGAGACCTGCTGGAAATGATGTCATTGGTATTGATTTAGGCACAACCAATTCATGTGTTTCCGTCATGGAAGGAAAGAACCCCAAAGTTATTGAGAACTCTGAGGGTGCTAGAACAACACCATCTGTGGTTGCTTTTAACCAGAAAGGGGAGCTGCTTGTTGGTACCCCAGCCAAACGTCAAGCTGTAACTAACCCGACAAACACTGTCTTTGGTACCAAGCGTTTGATTGGTAGACGCTTTGATGATCCTCAAACACAAAAAGAGATGAAAATGGTTCCGTTCAAGATTGTTAAGGCTCCAAATGGTGATGCGTGGGTTGAGGCTAATGGACAACAGTATTCTCCTAGCCAAATTGGTGCCTTTGTTCTCACCAAGATGAAGGAAACTGCTGAAGCTTATCTTGGAAAGTCAGTTTCGAAGGCGGTAATTACTGTACCGGCCTACTTCAATGATGCTCAGAGGCAGGCAACAAAAGATGCTGGTAGAATTTCAGGTCTTGATGTGCAGCGAATTATCAATGAACCCACTGCTGCTGCACTGTCATACGGGATGAACAACAAGGAGGGTCTCATTGCTGTTTTTGACCTTGGAGGTGGAACATTTGATGTATCCATCTTAGAAATTTCGAATGGTGTGTTTGAGGTGAAAGCAACAAATGGCGACACTTTCTTGGGAGGAGAGGATTTTGACAATGCCTTGTTGGATTTTCTGGTGAACGAATTTAAAAGAACAGAGAGTATTGACCTTTCAAAGGACAGGCTTGCACTTCAGAGGCTTCGTGAAGCTGCTGAGAAAGCTAAGATAGAGCTGTCTTCAACATCTCAAACTGAGATCAACCTGCCTTTCATTACTGCTGATGCTTCTGGTGCTAAGCATCTGAACATAACATTGACTAGATCTAAGTTTGAGGCTTTGGTAAATCACTTGATCGAAAGGACCAAGGCACCCTGCAAAAGCTGTTTGAAGGATGCTAACGTCTCTATCAAGGATGTTGATGAGGTTCTTCTTGTTGGAGGAATGACTAGGGTACCTAAAGTCCAAGAGGTGGTTTTAGAGATCTTTGGAAAATCTCCCAGTAAAGGAGTAAACCCTGATGAGGCAGTTGCCATGGGGGCAGCAATCCAAGGTGGTATCCTACGTGGAGATGTTAAAGAGCTACTACTCCTGGATGTAACACCGCTTTCTCTGGGTATTGAGACTTTGGGTGGTATCTTTACTAGGTTGATCAACCGCAACACTACTATTCCCACTAAGAAGAGTCAGGTCTTTTCAACTGCAGCTGACAATCAAACTCAGGTAGGTATCAAGGTGCTACAAGGTGAGCGGGAAATGGCTTCAGACAACAAAATGCTTGGAGAATTTGACCTTGTTGGTATACCTCCTGCTCCCAGAGGTCTTCCTCAGATTGAGGTCACGTTTGACATTGATGCCAATGGAATTGTTACCGTCTCTGCCAAAGATAAGTCTACTGGGAAAGAACAACAAATCACCATTCGGTCATCTGGCGGACTCTCGGAAGATGAGATCGAAAAGATGGTCAAAGAAGCAGAGTTGCATGCTCAGAAAGACCAAGAGAGAAAGAGTCTCATTGACATTAGAAATAGTGCTGACACTACTATATATAGCATCGAAAAGAGTTTAGGTGAATACCGAGAGAAGATTCCCAGTGAAGTGGCCAAAGAAATTGAGGATGCTGTTTCGGATTTGAGAAAGGCGATGTCAGGGGATAATGTTGATGAAATTAAATCAAAGCTTGACGCTGCAAACAAAGCTGTATCCAAAATTGGGGAGCACATGTCGGGTGGTTCTAGTGGTGGTTCCTCAGCCGGTGGTTCACAGGGTGGTGACCAGGCTCCAGAGGCAGAATATGAGGAGGTCAAGAAGTGA 2025 0.4528 MAAVLRSLRRRDVASATFSAYRSLTGSTKPAYVAQKWSCLARPFSSRPAGNDVIGIDLGTTNSCVSVMEGKNPKVIENSEGARTTPSVVAFNQKGELLVGTPAKRQAVTNPTNTVFGTKRLIGRRFDDPQTQKEMKMVPFKIVKAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAEAYLGKSVSKAVITVPAYFNDAQRQATKDAGRISGLDVQRIINEPTAAALSYGMNNKEGLIAVFDLGGGTFDVSILEISNGVFEVKATNGDTFLGGEDFDNALLDFLVNEFKRTESIDLSKDRLALQRLREAAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSKFEALVNHLIERTKAPCKSCLKDANVSIKDVDEVLLVGGMTRVPKVQEVVLEIFGKSPSKGVNPDEAVAMGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKMLGEFDLVGIPPAPRGLPQIEVTFDIDANGIVTVSAKDKSTGKEQQITIRSSGGLSEDEIEKMVKEAELHAQKDQERKSLIDIRNSADTTIYSIEKSLGEYREKIPSEVAKEIEDAVSDLRKAMSGDNVDEIKSKLDAANKAVSKIGEHMSGGSSGGSSAGGSQGGDQAPEAEYEEVKK 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g00254 674 Gene3D - 550 647 IPR029048 -
Phco11g00254 674 ProSitePatterns Heat shock hsp70 proteins family signature 3. 380 394 IPR018181 -
Phco11g00254 674 PRINTS 70kDa heat shock protein signature 52 65 - -
Phco11g00254 674 PRINTS 70kDa heat shock protein signature 103 111 - -
Phco11g00254 674 PRINTS 70kDa heat shock protein signature 187 207 - -
Phco11g00254 674 PRINTS 70kDa heat shock protein signature 377 393 - -
Phco11g00254 674 PRINTS 70kDa heat shock protein signature 408 428 - -
Phco11g00254 674 PRINTS 70kDa heat shock protein signature 245 255 - -
Phco11g00254 674 PRINTS 70kDa heat shock protein signature 512 528 - -
Phco11g00254 674 PRINTS 70kDa heat shock protein signature 431 450 - -
Phco11g00254 674 PRINTS 70kDa heat shock protein signature 80 92 - -
Phco11g00254 674 Gene3D Actin; Chain A, domain 4 272 359 - -
Phco11g00254 674 FunFam Chaperone protein DnaK HSP70 421 604 - -
Phco11g00254 674 MobiDBLite consensus disorder prediction 646 660 - -
Phco11g00254 674 Coils Coil 295 322 - -
Phco11g00254 674 FunFam Molecular chaperone DnaK 550 650 - -
Phco11g00254 674 FunFam Molecular chaperone DnaK 54 235 - -
Phco11g00254 674 Gene3D - 54 422 - -
Phco11g00254 674 Pfam Hsp70 protein 53 645 IPR013126 GO:0005524|GO:0140662
Phco11g00254 674 FunFam Chaperone protein HscA homolog 236 293 - -
Phco11g00254 674 ProSitePatterns Heat shock hsp70 proteins family signature 1. 56 63 IPR018181 -
Phco11g00254 674 Hamap Chaperone protein DnaK [dnaK]. 50 672 IPR012725 GO:0005524|GO:0006457|GO:0051082
Phco11g00254 674 ProSitePatterns Heat shock hsp70 proteins family signature 2. 239 252 IPR018181 -
Phco11g00254 674 CDD HSPA9-like_NBD 50 425 - -
Phco11g00254 674 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 425 549 IPR029047 -
Phco11g00254 674 Gene3D - 229 409 - -
Phco11g00254 674 SUPERFAMILY Actin-like ATPase domain 234 425 IPR043129 -
Phco11g00254 674 SUPERFAMILY Actin-like ATPase domain 53 233 IPR043129 -
Phco11g00254 674 NCBIfam molecular chaperone DnaK 53 645 IPR012725 GO:0005524|GO:0006457|GO:0051082
Phco11g00254 674 FunFam Molecular chaperone DnaK 272 359 - -
Phco11g00254 674 MobiDBLite consensus disorder prediction 638 674 - -
Phco11g00254 674 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 427 583 IPR029047 -
Phco11g00254 674 PANTHER HEAT SHOCK PROTEIN 70KDA 53 610 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g00254 Phco-Chr11 1661496 1664767 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g00254 11 1661496 1664767 Phco11g00254 11 1661496 1664767 ECH
Phco4g02469 4 45849051 45852244 Phco11g00254 11 1661496 1664767 PCT