Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02465 ATGGCGGCAGTGAAGAGCGAAGACCCAGAAAAGGCATGCGTGGAAGAAGACGACGAAGAAGAGTCTCCCATAGAGGAAGTGAGATTAACGGTGAGGAACACAGATGACCCGACCCAACCGGTATGGACCTTCCGAATGTGGTTCCTGGGTTTGCTCTCATGCTCCCTCTTGTCCTTCCTCAACCAGTTCTTCGCCTACCGGACGGAGCCACTCGTCATCACTCAGATCACAGTGCAGGTGGCCACGCTCCCCATTGGCCACCTCATGGCCAAGCTCCTCCCCACCACCACTTTCCGGATCCCCGGGTTCGGGTCGAAGCGGTTCTCCTTCAACCCGGGGCCCTTCAACATGAAGGAGCACGTCCTGGTGACCATATTCGCCAATGCAGGTAGCGCGTTCGGGAACGGGTCGCCCTACGCGGTGAGCATCATAAACATCGTGAAAGCCTTTTATGGGAGGAAAATATCTTTCATTGCTTCATGGATCCTCGTCATCACCACTCAGGTGTTGGGATACGGTTGGGCAGGGTTGCTGAAGAAGTATGTGGTGGAGCCTGCCCACATGTGGTGGCCCAGTAGCCTCGTTCAGGTCTCTCTTTTCCGGGCTATGCATGAGAAAGATGATGGCAGGTTTTCGAGGGCAAAGTTTTTCTTTATTGCACTAGTTTGCAGTTTTATTTGGTATGTGGTCCCTGGATACTTCTTCTCAACGCTCACAAACATATCATGGGTGTGTTGGATATTCTCAAAGTCAGTGACGGCTCAGCAGCTAGGCTCGGGAATGAACGGCTTAGGACTTGGTGCACTCACACTTGACTGGTCTGCTGTAGCATCATTTTTGTTCAGCCCTCTCATCTCACCCTTCTTTGCCATTGTCAACATTTTTCTGGGCTACGCACTGATAGTGTATGCTGTGATTCCTATTGCATACTGGGGCTTTAACACGTACAATGCAAATAGGTTTCCTATTTTCTCATCAGACTTGTTCACATCCAATGGCCAAGAATACAACATATCTGCAATTGTTAATGAAAACTTTGAGCTAGATCTTGACAAGTATAACCAACAAGGTCGAATTAATCTTAGTGTCTTCTTCTCTCTTACTTACGGATTTGGGTTTGCCACCATTGCATCCACCCTTACACATGTTGCTTTTTTCTATGGACGGGAGATTATGGAGCGATATCGTGCTTCAGCAACAGGCAAAGAAGATATCCACACAAAACTGATGAAAAAATACAAAGACATACCTTCTTGGTGGTTTCATGTGATGCTGGGCGTGACACTTGTGGTTTCTCTCATGCTATGCATATTTCTAAATGACCAGGTTCAGATGCCGTGGTGGGGACTTGTCTTTGCTTCAGCCTTGGCCTTCGTATTTACACTCCCAGTTAGTGTTATAACTGCTACCACAAACCAGACACCAGGACTAAATATTATTACGGAGTATATCTTTGGTATCATTTATCCCGGAAGACCAATAGCAAATGTATGCTTCAAAACCTTTGGTTACATAAGCATGGCTCAGGCTGTCTCCTTCCTTAGCGATTTCAAGCTTGGCCACTACATGAAGATCCCTCCAAGATCGATGTTTTTAGTACAGTTCATTGGTACAATGCTTGCTGGATCCATAAGCACTGGTGTAGCATGGTGGTTGCTGAACTCTGTCCATAACATATGCCATAGAGACCTCCTTCCTGAAGGCAGTCCCTGGACCTGTCCAAGTGACCATGTTTTCTTTGATGCATCAGTTATCTGGGGTCTGGTGGGACCTAGGAGGATCTTCGGTCCTCATGGAAACTACCAAGCATTGAATTGGTTTTTCCTTGGAGGTGCAATAGGGCCAATACTAGTTTGGCTATTGCACAAGGCATTCCCGAAGCAGTCATGGATTCCCTTGATCAATCTTCCAGTCCTTCTGGGGGCAACTGGAATGATGCCACCAGCAACAGCACTGAACTACAATGCTTGGATTATAATTGGAACTATTTTCAACTTCTTTGTCTTCCGTTACAGGAAGAAGTGGTGGCAGAGATACAACTATGTTCTATCAGCAGCCCTTGATGCAGGGGTTGCTTTTATGGCTGTTCTGCTCTACTTTGCAGTAGGCCTGGAAAACAAAAGCATTTCTTGGTGGGGAAATGATGGGGAGCATTGTCCCCTTGCAACTTGCCCTACAGCAAAGGGCATAGTGGTTGATGGCTGCCCTGTATATTAA 2217 0.4714 MAAVKSEDPEKACVEEDDEEESPIEEVRLTVRNTDDPTQPVWTFRMWFLGLLSCSLLSFLNQFFAYRTEPLVITQITVQVATLPIGHLMAKLLPTTTFRIPGFGSKRFSFNPGPFNMKEHVLVTIFANAGSAFGNGSPYAVSIINIVKAFYGRKISFIASWILVITTQVLGYGWAGLLKKYVVEPAHMWWPSSLVQVSLFRAMHEKDDGRFSRAKFFFIALVCSFIWYVVPGYFFSTLTNISWVCWIFSKSVTAQQLGSGMNGLGLGALTLDWSAVASFLFSPLISPFFAIVNIFLGYALIVYAVIPIAYWGFNTYNANRFPIFSSDLFTSNGQEYNISAIVNENFELDLDKYNQQGRINLSVFFSLTYGFGFATIASTLTHVAFFYGREIMERYRASATGKEDIHTKLMKKYKDIPSWWFHVMLGVTLVVSLMLCIFLNDQVQMPWWGLVFASALAFVFTLPVSVITATTNQTPGLNIITEYIFGIIYPGRPIANVCFKTFGYISMAQAVSFLSDFKLGHYMKIPPRSMFLVQFIGTMLAGSISTGVAWWLLNSVHNICHRDLLPEGSPWTCPSDHVFFDASVIWGLVGPRRIFGPHGNYQALNWFFLGGAIGPILVWLLHKAFPKQSWIPLINLPVLLGATGMMPPATALNYNAWIIIGTIFNFFVFRYRKKWWQRYNYVLSAALDAGVAFMAVLLYFAVGLENKSISWWGNDGEHCPLATCPTAKGIVVDGCPVY 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02465 738 MobiDBLite consensus disorder prediction 1 23 - -
Phco4g02465 738 Pfam OPT oligopeptide transporter protein 42 702 IPR004813 GO:0035673
Phco4g02465 738 NCBIfam small oligopeptide transporter, OPT family 19 706 IPR004648 GO:0055085
Phco4g02465 738 PANTHER ISP4 LIKE PROTEIN 14 737 IPR004648 GO:0055085
Phco4g02465 738 NCBIfam OPT family oligopeptide transporter 25 704 IPR004813 GO:0035673
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02465 Phco-Chr4 45802502 45805677 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g02465 4 45802502 45805677 Phco11g00251 11 1625781 1640385 PCT
Phco11g00252 11 1643459 1649095 Phco4g02465 4 45802502 45805677 PCT