Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g00252 ATGACCTCCGTTTCTGACCCAGAGAAGCCGGTCACATCCCTGGTGGAAGACCAAGAAGACGACGACGTTTCTCCAATCGAAGAGGTTCGTCTCACGGTCACCAACACCGACGACCCGACCCGGCCCGTATGGACCTTCCGGATGTGGCTCCTGGGTCTCCTCTCCTGCTCCCTTCTCTCCTTCCTCAACCAGTTCTTCGCCTACCGTACGGAGCCTCTCATCATTACTCAAATCACCATTCAAGTCGCCACACTCCCTATTGGCCACTTCATGGCCGCGGTTCTACCCGAAACCAAGTTCACTCTTCCCGGGTTCGGGTCCAAATCATTCTCACTCAACCCGGGCCCGTTTAACATGAAGGAGCACGTCCTCATTACCATATTCGCCAACGCCGGAAGCGCTTTCGGATCCGGGTCGCCCTACGCCGTTGGTATCGTTAACATTATCAAAGCTTTTTACGGACGCAGCATCTCCTTTTTTGCTTCTTGGCTTCTCATCATTACTACACAGGTGCTAGGATATGGATGGGCCGGATTATTGAGGAAATACGTGGTGGAACCGGCCCATATGTGGTGGCCCAGCACTCTCGTTCAAGTTTCACTTTTCCGAGCATTGCATGAGAAAGATGACCAACGACTTTCACGGGCGAAGTTTTTCTTTATTGCACTATTGTGCAGTTTTTTTTGGTACGTGATCCCTGGATACTTGTTCACAACGCTCACAAACATCTCATGGGTGTGTTGGATATTCTCCAAGTCAGTTACAGCTCAGCAGATAGGTTCAGGCATGAGGGGCCTTGGAGTTGGAGCCCTCACACTTGATTGGGCTGCTGTGGCATCATTCTTGTTCAGCCCTCTTATCTCACCCTTCTTTGCCATTGTCAATGTTTTTGTGGGCTACGCATTAATAGTCTATGCTGTTATTCCTATAGCTTACTGGGGCCTCAATGTGTACAATGCCAATAGGTTTCCCATTTTCTCCTCACACTTATTTACTGCACAAGGTCAAAGGTACAACATACCTGCTATCGTAGACGACCATTTCCAGTTAAATGTTGCAGAGTATGAAAAGCAAGGTAGAATTCATCTCAGTGTGTTTTTCGCCCTCACTTATGGCTTCGGATTTGCCACCATAGCATCCACCCTCACACATGTGTTCTGCTTCTATGGAAGGGAGATTATGGAACGCTATCGTGCTTCTTCCAAAGGGAAAGAAGATATTCACACAAAATTGATGAAAAGATACAAAGACATACCTTCCTGGTGGTTTTATTTATTGCTGGTTGTGACCCTTGTGGTTTCTCTCGCACTATGCATCTTTCTAAATGACCAGGTTCAAATGCCCTGGTGGGGACTTCTCTTTGCAGGAGCCCTAGCTTTCGGATTTACCCTCCCCATTAGCATCATCACTGCCACCACAAACCAGACACCAGGGTTGAATATCATCACTGAATATGTCTTTGGTCTCATTTACCCGGGAAGACCAATTGCAAATGTATGCTTCAAAACCTATGGTTACATTAGCATGGCCCAGGCTGTCTCTTTCCTCAGTGATTTCAAACTTGGGCACTACATGAAAATCCCTCCAAGATCAATGTTCTTAGTTCAGTTCATAGGTACAATGCTCGCTGGAACCATCAACATTGGGGTAGCATGGTGGTTGCTGAACTCCGTCAAGAACATATGTCATGATGATCTCCTTCCTGCAGACAGTCCCTGGACATGCCCTGGTGACCGTGTATTCTTTGATGCATCAGTTATTTGGGGCCTTGTGGGGCCAAAGCGAATCTTTGGTTCTCAAGGAAACTACAGTGCAATGAATTGGTTTTTCCTTGGAGGTGCTTTAGGACCCGTAATTGTTTGGCTATTGCACAAAGCATTTCCAAAACAGTCATGGATTCCACTGATCAACCTCCCAGTTCTCCTGGGAGCGACTGGAATGATGCCACCAGCAACACCGTTGAACTACAATGCCTGGATTTTGGTTGGGACAATTTTCAACTTCTTTATCTTCCGTTACAGAAAGAAATGGTGGCAGAGGTATAACTATGTTCTGTCAGCGGCACTTGACAGTGGGGTTGCTTTTATGACTGTCTTACTCTACTTCTCATTGGGTTTGGAAAACAAGAGTCTGAATTGGTGGGGAAATGACGGTGAACATTGTCCACTCGCAGCTTGCCCAACTGCAAAAGGCGTAATCGTTGATGGTTGCCCTGTAAACTAG 2223 0.4705 MTSVSDPEKPVTSLVEDQEDDDVSPIEEVRLTVTNTDDPTRPVWTFRMWLLGLLSCSLLSFLNQFFAYRTEPLIITQITIQVATLPIGHFMAAVLPETKFTLPGFGSKSFSLNPGPFNMKEHVLITIFANAGSAFGSGSPYAVGIVNIIKAFYGRSISFFASWLLIITTQVLGYGWAGLLRKYVVEPAHMWWPSTLVQVSLFRALHEKDDQRLSRAKFFFIALLCSFFWYVIPGYLFTTLTNISWVCWIFSKSVTAQQIGSGMRGLGVGALTLDWAAVASFLFSPLISPFFAIVNVFVGYALIVYAVIPIAYWGLNVYNANRFPIFSSHLFTAQGQRYNIPAIVDDHFQLNVAEYEKQGRIHLSVFFALTYGFGFATIASTLTHVFCFYGREIMERYRASSKGKEDIHTKLMKRYKDIPSWWFYLLLVVTLVVSLALCIFLNDQVQMPWWGLLFAGALAFGFTLPISIITATTNQTPGLNIITEYVFGLIYPGRPIANVCFKTYGYISMAQAVSFLSDFKLGHYMKIPPRSMFLVQFIGTMLAGTINIGVAWWLLNSVKNICHDDLLPADSPWTCPGDRVFFDASVIWGLVGPKRIFGSQGNYSAMNWFFLGGALGPVIVWLLHKAFPKQSWIPLINLPVLLGATGMMPPATPLNYNAWILVGTIFNFFIFRYRKKWWQRYNYVLSAALDSGVAFMTVLLYFSLGLENKSLNWWGNDGEHCPLAACPTAKGVIVDGCPVN 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g00252 740 MobiDBLite consensus disorder prediction 1 23 - -
Phco11g00252 740 PANTHER ISP4 LIKE PROTEIN 17 739 IPR004648 GO:0055085
Phco11g00252 740 NCBIfam OPT family oligopeptide transporter 27 706 IPR004813 GO:0035673
Phco11g00252 740 Pfam OPT oligopeptide transporter protein 44 703 IPR004813 GO:0035673
Phco11g00252 740 NCBIfam small oligopeptide transporter, OPT family 22 708 IPR004648 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g00252 Phco-Chr11 1643459 1649095 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g00252 11 1643459 1649095 Phco11g00252 11 1643459 1649095 ECH
Phco11g00252 11 1643459 1649095 Phco4g02465 4 45802502 45805677 PCT