Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02347 ATGAAATATCACAGGAAAATAGTGCAAGAGTTGAAGCCTGCGTCGCTGATGGTACTAGCGCAGGTTGCTACTGCTGCTGTGAATGTGCTTTACAAGTTGGCCATAAATGATGGAATGAGCATTCTGGTACTCACTTCCTACCGTCACATTTTCGGAGCTGCTTTCTCTCTTTCTCTTGCTCTTGTTATAGAAAGAAAGAGCAGGCCAAAGTTGACATGGAGGGTGCTTTTGATGTCATTTTTTTGCGGTCTATTTGGAGGGAGTTTAGCGCAAAACCTTTATTTCATTGGCTTGGCTTGGGTATCAGCAACATTTGCTACTTCCCTTTATAATCTCGTTCCAGTGGTTACTTTTATCTTCTCCGTTTTGTTCAGGTTAGAAAAGTTAAGTTTGCGAACCGCTGCAGGGAGGGTGAAGGTGTTGGGACCAATAATAGGTATTGTTGGGTCAATGCTGCTGACATTTTACAGAGGGGCACAAATTAAGATTTGGACCTTCCACACTAATCTTTTGCATAAAAATCAAAATGGACACCTAGGATCATCGCATGCTGACTCTGGAAGAAGATGGGTAGGTGTTTTATGTGGTCTTGGAAGTGTTCTAAGTTTTTCATCCTGGCTCATCATTCAGACCAAGATGAGTAAAGAATATCCAAGCCATCTTTCAAGTACTGCATTGATGACCTCAATGGGGGCAATACAAGCCACAGTCTTTGCTTTATGTGTTGAGAAGGATTGGAGCCAATGGAGGGTGGGTTGGAGTATCAGGCTTCTAACTGCGGCTTTTTCAGGAATTGTGGTCTCTGGATTATTTGTTATTGTCATTGCTTGGTGTGTTGGGGTTAAGGGTCCATTGTATGCATCTGTTTTCAACCCTCTCTCGCTTGTGATTGTGGCTATTTTTGCTCCCTTGCTGTTGGATGAAAATCTATATCTAGGAAGTGTAATCGGAGCAGTGCTTATTGTGTGTGGGTTGTACATGGTGCTGTGGGGTAAAAGCAAAGAAATAAAAACATCATCAGAAGAAACCGAAAATGTTGAAGCGAGTGCAGGTGTTGAAATTACCACAGTGGGTCGTGACAATACATAG 1089 0.4252 MKYHRKIVQELKPASLMVLAQVATAAVNVLYKLAINDGMSILVLTSYRHIFGAAFSLSLALVIERKSRPKLTWRVLLMSFFCGLFGGSLAQNLYFIGLAWVSATFATSLYNLVPVVTFIFSVLFRLEKLSLRTAAGRVKVLGPIIGIVGSMLLTFYRGAQIKIWTFHTNLLHKNQNGHLGSSHADSGRRWVGVLCGLGSVLSFSSWLIIQTKMSKEYPSHLSSTALMTSMGAIQATVFALCVEKDWSQWRVGWSIRLLTAAFSGIVVSGLFVIVIAWCVGVKGPLYASVFNPLSLVIVAIFAPLLLDENLYLGSVIGAVLIVCGLYMVLWGKSKEIKTSSEETENVEASAGVEITTVGRDNT 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02347 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 248 334 - -
Phco4g02347 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 148 - -
Phco4g02347 362 Pfam EamA-like transporter family 13 141 IPR000620 GO:0016020
Phco4g02347 362 Pfam EamA-like transporter family 191 329 IPR000620 GO:0016020
Phco4g02347 362 PANTHER WAT1-RELATED PROTEIN 13 339 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02347 Phco-Chr4 44605418 44607512 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g02347 4 44605418 44607512 Phco4g02347 4 44605418 44607512 ECH
Phco7g01683 7 16639593 16644666 Phco4g02347 4 44605418 44607512 ECH
Phco4g02347 4 44605418 44607512 Phco11g00138 11 897060 900842 PCT