Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g00138 ATGAAGAATGTGTGCAATGTGGTGCAGGCGCTGAAACCAACCCTGCTAATGCTGCTGGTGCAAGTAGCATTTGCTGGTGTCAATATCTTCTACAAGCTCGCCGTTAACGATGGCATGAACTTGAGGATTATTGTTGCCTACCGCTTTCTATTTGCCGCCATTTTCATTGCTCCACTTGCTTTCATTCTTGAAAGGAAGAAGAGGACAAAGATGAGTTGGACCATACTGTTTCAGTCATTTCTTTGCGGCTTATTTGGGGGATCGTTAGCTCAAAATTTCTACTTGCAAGCTCTGTCTTTAACATCTGCAACTTTTGCATCTGCAATGGCTAATCTTGTACCAGGCATAACCTTTATCTTGGCCGTTTGCTTTGGTTTGGAAAGGTTAAATTTGAGAACAACATCTGGAAAAGCCAAAATACTGGGTACATTAATTGGAATTAGTGGAGCAATGGTGCTTACTTTTGTTAAAGGTGAACATATCAAGATAGGGACGTTTCACTTTAACCTTTTGCACCAGAACGGTGCGCACCCACAGCCGCAGGCTACTGGTGCCAAGACTGTTTTGGGTTCTTTGTGCGCTCTGGCTAGTGGCGTCAGTTATGCGCTGTGGCTCATCATTCAGGCGAAGATGATTGAAAGATACCCTAGTCCTTACTCTAGTACGGCGTTGATGTCACTGTGGGGGGCACTGGTCTCCATCGTTTTTGCACTTTGCCTTGAGAGGGACTGGAGTCAGTGGAGGTTGGGTTGGAATATTAGGCTTTGGACTGCAGCATATTCGGGTATTGTGGTTTCTGGGATTATGGTGGTTGTGATTTCATGGTGCATCCGCATGAGGGGCCCATTGTTTGCCTCTGTTTTTAATCCTCTGATGCTTGTGTTGGTGGCCTTGGCTAGTTCTACCATGTTGAAGGAGAAGCTACACCTCGGATGCATTATTGGAGCAGTGCTGATTGTGTGTGGCTTGTACGTGGTTTTATGGGGTAAAAGTGAAGAGATGAAGAGGAAGAATCAATTGGTGCCAGCACATAACCCCCATGAGGATGAGTCTAATAAGGTGGAAGTAGTGGTGAGGTGTGAAGGAGAAGACAAAAGCAGCCAAAAGAAAAGGCATGAGAATGGTGAAAAAACAGTTAGGGGTAACCACGAAGATGGAGACGTAGAGCATGATTCACATGTACACAGTGAGGGAAACGAAGGAACAGAAGAGGAAAATTCTAGTAATGTTTTGGGTGCTTAA 1242 0.4501 MKNVCNVVQALKPTLLMLLVQVAFAGVNIFYKLAVNDGMNLRIIVAYRFLFAAIFIAPLAFILERKKRTKMSWTILFQSFLCGLFGGSLAQNFYLQALSLTSATFASAMANLVPGITFILAVCFGLERLNLRTTSGKAKILGTLIGISGAMVLTFVKGEHIKIGTFHFNLLHQNGAHPQPQATGAKTVLGSLCALASGVSYALWLIIQAKMIERYPSPYSSTALMSLWGALVSIVFALCLERDWSQWRLGWNIRLWTAAYSGIVVSGIMVVVISWCIRMRGPLFASVFNPLMLVLVALASSTMLKEKLHLGCIIGAVLIVCGLYVVLWGKSEEMKRKNQLVPAHNPHEDESNKVEVVVRCEGEDKSSQKKRHENGEKTVRGNHEDGDVEHDSHVHSEGNEGTEEENSSNVLGA 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g00138 413 Pfam EamA-like transporter family 189 327 IPR000620 GO:0016020
Phco11g00138 413 Pfam EamA-like transporter family 13 154 IPR000620 GO:0016020
Phco11g00138 413 MobiDBLite consensus disorder prediction 360 413 - -
Phco11g00138 413 PANTHER WAT1-RELATED PROTEIN 13 341 IPR030184 GO:0016020|GO:0022857
Phco11g00138 413 MobiDBLite consensus disorder prediction 360 402 - -
Phco11g00138 413 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 155 - -
Phco11g00138 413 SUPERFAMILY Multidrug resistance efflux transporter EmrE 227 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g00138 Phco-Chr11 897060 900842 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g02347 4 44605418 44607512 Phco11g00138 11 897060 900842 PCT