Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02063 ATGGAAGTGATGGCATACCAGCTTTCCCGGTTGCCTTACTCGGATTCCCTCAAACTGCTCGAGGCTGATATACACCACGCAAATGCTTTGGCTGCTGAAATAACTAGGGCCAAGGGTGAGACTCTTCTCCAAATGAAATTGGCTTACGACCATCTGGCTCCTCTCTTTTTGTTGTTGCTACAGTGGATGGATTTTTCTTGTACATGCTTTCTACTCAGATATCTTGACCTCTTCCACATAGTTGTATACAAGGTACACAATGATGGTAGATCAAATACTCATGGAAGGAAAGCAACCATCAGGGAATTTTATGCTATTATTCTGCCATCTCTTGAAAGACTTCATGGTAGCATGGAGAAGTTAGACATTTGTAAGAATGGACATTCCAGCGTAGATGGCTCAAGCTATGGCAAGAAAATGATTGAAGGAGATGCAAAACCAATCAACGTCGATTTGGAAAGAGAAGATGAATGTGGGGTATGCTTGGAGCCTTGCACGAAAATGGTTTTACCCAATTGCTGTCATGCTATGTGTATCAAATGCTACCACAAGTGGAACAAACTGTCAGAGTCTTGCCCTTTTTGCCGTGGCAGCTTAAGGAGAGTTAATTCTGAGGATCTATGGGTACTCACTTGTAATGAAGATGTTGTTGATGCTGAAACAGTTTCCAAGGAGGACCTGTTACGTTTCAACCTTTATATCAACAACCTACCTAAAGATCACCCGGATGCACTTTTCTTCATGTATTATGAGTATCTGATTTGA 765 0.4183 MEVMAYQLSRLPYSDSLKLLEADIHHANALAAEITRAKGETLLQMKLAYDHLAPLFLLLLQWMDFSCTCFLLRYLDLFHIVVYKVHNDGRSNTHGRKATIREFYAIILPSLERLHGSMEKLDICKNGHSSVDGSSYGKKMIEGDAKPINVDLEREDECGVCLEPCTKMVLPNCCHAMCIKCYHKWNKLSESCPFCRGSLRRVNSEDLWVLTCNEDVVDAETVSKEDLLRFNLYINNLPKDHPDALFFMYYEYLI 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02063 254 Pfam Ring finger domain 156 196 IPR001841 -
Phco4g02063 254 PANTHER RING FINGER PROTEIN 41, 151 12 252 - -
Phco4g02063 254 SUPERFAMILY RING/U-box 149 200 - -
Phco4g02063 254 ProSiteProfiles Zinc finger RING-type profile. 158 196 IPR001841 -
Phco4g02063 254 ProSitePatterns Zinc finger RING-type signature. 173 182 IPR017907 -
Phco4g02063 254 SMART ring_2 158 195 IPR001841 -
Phco4g02063 254 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 137 207 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02063 Phco-Chr4 40874963 40876711 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02939 2 58336822 58338284 Phco4g02063 4 40874963 40876711 PCT