Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02939 ATGGCAATGATTCCGTACCAACTTTCCCGTTTACCTTACCACGATTCCCTCAAAGTACTTGAGGCTGATATACAGCACGCCAATGCTTTGGCTGCTGCAATTCCCAGAGCCAAGGGTGGGACTATTCTTCAAATGAAATTGGTTTACAATCAGTTGGCTCCTCTCGTCCTGTTATTTCTACAATGGATGGATTGTTCTTGTGCAGGCTTTCTCCATAAGTATCTCAACCTCTTCCACGTGATTATATACAAGGTACATAATGATGGTAGATCAAACATGTCTACACATGGAAGGAAGGCTACCATTGGGGACTTTTATGCCGTTATATTGCCATCTCTCCAACGACTTCATGGTAGTTTGGAGAAGCTGGAGGCTGTTGAAGAAGGACAATCAAGCATAGAAGGTTCAAGTTATGGCAATAAGTTGATTGAAGCAAGTGGGAGACTAACCAATATTGATTTGCAAAGAGAAGATGAATGTGGGATCTGCTTAGAGTCTTGCACCAAAATGGTTTTACCTGGTTGCTGCCATGCCATGTGTATTAAATGCTACCGCAAGTGGAACAGAAAGTCAGAGTCTTGTCCTTTTTGTCGTGGCAGCTTGAGGAGAGTTAATTCAGAGGATCTATGGGTACTAACTTGTGACGATGATGTTGTTGACGCTGAAACAGTTTCTAAAGAGGACTTGTTGCGTTTTTACCTCTATATCAGCAAGCTGCCTAAAGATCACCCAGATGCACTTTTCCTAATGTATTATGAATACCTCATCTAA 771 0.4202 MAMIPYQLSRLPYHDSLKVLEADIQHANALAAAIPRAKGGTILQMKLVYNQLAPLVLLFLQWMDCSCAGFLHKYLNLFHVIIYKVHNDGRSNMSTHGRKATIGDFYAVILPSLQRLHGSLEKLEAVEEGQSSIEGSSYGNKLIEASGRLTNIDLQREDECGICLESCTKMVLPGCCHAMCIKCYRKWNRKSESCPFCRGSLRRVNSEDLWVLTCDDDVVDAETVSKEDLLRFYLYISKLPKDHPDALFLMYYEYLI 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02939 256 ProSiteProfiles Zinc finger RING-type profile. 160 198 IPR001841 -
Phco2g02939 256 Pfam Ring finger domain 158 198 IPR001841 -
Phco2g02939 256 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 139 209 IPR013083 -
Phco2g02939 256 ProSitePatterns Zinc finger RING-type signature. 175 184 IPR017907 -
Phco2g02939 256 SMART ring_2 160 197 IPR001841 -
Phco2g02939 256 PANTHER RING FINGER PROTEIN 41, 151 12 254 - -
Phco2g02939 256 SUPERFAMILY RING/U-box 151 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02939 Phco-Chr2 58336822 58338284 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02939 2 58336822 58338284 Phco2g02939 2 58336822 58338284 ECH
Phco2g02939 2 58336822 58338284 Phco4g02063 4 40874963 40876711 PCT