Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02054 ATGCCTCCTTCTCAATTTCCTCTTCGTTGGGAAACTACAGGAGACCAGTGGTGGTATGCATCTCCCATTGATTATGCTGCTGCAAATGGCCTCTATGATCTCGTCACTGAGCTTCTCCACCTTGATACCAACCTCCTCATCAAGCTCACCTCCCTCCGCCGAATTCGCCGCCTTGAAGCCGTCTGGGACGATGAGTCTAGGTTTGAGGATGTCGCCAAGTGCCGCTCCAAGGTTGCTAGGAATCTTATGCTCGAGTGTGAGATAGGAAAAGGGCACAACTCTCTCATCCGTGCAGGCTATGGTGGATGGCTTCTCTACACTGCTGCCTCGGCTGGGGATGCTGACTTTGTTCTCGAGTTGTTGGGGAGAGACCCTCTGTTGGTGTTTGGTGAAGGAGAGTATGGTGTCACTGACATGCTGTATGCTGCAGCCAGGGGCAAGAACTGTGAGGTCTTTAAACTCCTGCTTCATTCTGCTCTGTCAAGAAAGGATAGTCTTGCTGGCAGTGAAGCAGAATTGGAAGAGAAGTTGGATGAAGGTTCTAAGGTTTTCAAGAGGGATGTGATGAATAGGGCCATCCATGCTGCTGCCAGAGGAGGGAATTGGGAAATACTGAAGCAGCTTCTAGGAAGTGTTTCTGTTTCTCAGATTTTCTCTTATAGAGATTCCCAAGGATCTACTGTCTTGCATGCAGCTGCTGCAAGAGGCCAGGTTGAGGTTGTGAGAAATCTAATTGAATCCTATGATATCGTCAACTCAACTGATACTCAAGGAAATACAGCATTACATCTAGCTTCTTACAGAGGTTACTTACCTGTGGTAGAGATTCTGATTGGAGCATCTCCCTCATTAACAACTTTAGCCAATAACTATGGAGATACTTTTCTTCACATGGCAGTGGTTGGTTTCAGAAGCCCTGGTTTCTGTAGACTGGACAAGCACATCGAACTCATGAAGCAATTGACAACTGAAAAGATTGTGAGCATGAAGGACATCATCAATGTCAGGAACAATGAAGGAAGAACAGCTCTTCACGTTGCTGTGATGCATAATATCAAATGTGATGTGGTGGAACTACTGATGTCTGTTTCATCAATTGATTTGAACATTCGTGATGCTGATGGCGTGACCCCTTTGGATCATCTTAGGCGAAGATCAAGTTCAGCATCTTCTGACATTTTAATCAAGCAGTTAATTTCAGCTGGAGGGATCTCTAATTGTACGGACTATATGACAAGAAATGCTCTTGTTAACCATCTTAGGACTCATGGTATCGGAGCCAGTCCTGGAACATCATTTAGAATACCAGATTCTGAGATATTGTTGTACACTGGCATTGAGAATTCATGTGATACCAATTATGATCAGGCAAGTGTGGAATCAAATTCATGGTCAAGTGAAATAAACAATTATGACTCAGCCAATTCCCCATGCAACAGCAACTTTAGTTCTGTTAATTATGGTCCAAGGCGTTTGAAGTTTCTGCTCCAGTGGCATGGGATAAGGGACACAAAAGAAGCAGCCTCGGAGTTGGAAGATGATATTTCTGTGAATTCTTTTAGTTCAAGGAACAACTTGGAAGACCTTCCCATCCCATTGAGGCAAAAATACTCAAAAATGTGTTCTCTTCCAAACAACAAAAGAACACTATCTATAAGGACTTATCTTCCAAGTGCTTCAGCCAAAAAATATTTTCATGCAGGCCTAATGCAAGGCGTGATTAAGGTAAAGCCACAAGGCCCTCTACCTGTTCATTCAACTTCTAGTCTTTTTCAGGAGCTATCTATCTCTTCTCATGCTTCGAATAATAAGCAAAATCGTGTTGATATAATGGAACCCTCTTGCTCCAATCGACCAATGCATGGTGGTGGCAGCCTACACTTGAACTATAAGCAGGGCTCTTTCAATAAGAAAATGATGAACCGGTATTTTTCTTTTGGAGCACATGGCCAGGCTTTGGAAGATGCAAATAGCTGCACAAAGTCAAATCGCAGCTCTAAGAATTTTAGTTCTTTAGTTGCATAA 2025 0.4341 MPPSQFPLRWETTGDQWWYASPIDYAAANGLYDLVTELLHLDTNLLIKLTSLRRIRRLEAVWDDESRFEDVAKCRSKVARNLMLECEIGKGHNSLIRAGYGGWLLYTAASAGDADFVLELLGRDPLLVFGEGEYGVTDMLYAAARGKNCEVFKLLLHSALSRKDSLAGSEAELEEKLDEGSKVFKRDVMNRAIHAAARGGNWEILKQLLGSVSVSQIFSYRDSQGSTVLHAAAARGQVEVVRNLIESYDIVNSTDTQGNTALHLASYRGYLPVVEILIGASPSLTTLANNYGDTFLHMAVVGFRSPGFCRLDKHIELMKQLTTEKIVSMKDIINVRNNEGRTALHVAVMHNIKCDVVELLMSVSSIDLNIRDADGVTPLDHLRRRSSSASSDILIKQLISAGGISNCTDYMTRNALVNHLRTHGIGASPGTSFRIPDSEILLYTGIENSCDTNYDQASVESNSWSSEINNYDSANSPCNSNFSSVNYGPRRLKFLLQWHGIRDTKEAASELEDDISVNSFSSRNNLEDLPIPLRQKYSKMCSLPNNKRTLSIRTYLPSASAKKYFHAGLMQGVIKVKPQGPLPVHSTSSLFQELSISSHASNNKQNRVDIMEPSCSNRPMHGGGSLHLNYKQGSFNKKMMNRYFSFGAHGQALEDANSCTKSNRSSKNFSSLVA 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02054 674 SMART ANK_2a 100 129 IPR002110 GO:0005515
Phco4g02054 674 SMART ANK_2a 18 47 IPR002110 GO:0005515
Phco4g02054 674 SMART ANK_2a 188 219 IPR002110 GO:0005515
Phco4g02054 674 SMART ANK_2a 374 409 IPR002110 GO:0005515
Phco4g02054 674 SMART ANK_2a 291 331 IPR002110 GO:0005515
Phco4g02054 674 SMART ANK_2a 224 253 IPR002110 GO:0005515
Phco4g02054 674 SMART ANK_2a 134 164 IPR002110 GO:0005515
Phco4g02054 674 SMART ANK_2a 257 286 IPR002110 GO:0005515
Phco4g02054 674 SMART ANK_2a 339 370 IPR002110 GO:0005515
Phco4g02054 674 SUPERFAMILY Ankyrin repeat 105 395 IPR036770 -
Phco4g02054 674 ProSiteProfiles Ankyrin repeat profile. 257 289 IPR002110 GO:0005515
Phco4g02054 674 PANTHER ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATED 4 413 - -
Phco4g02054 674 Pfam Ankyrin repeat 340 372 IPR002110 GO:0005515
Phco4g02054 674 ProSiteProfiles Ankyrin repeat region circular profile. 257 278 - -
Phco4g02054 674 Gene3D - 11 423 IPR036770 -
Phco4g02054 674 ProSiteProfiles Ankyrin repeat profile. 224 256 IPR002110 GO:0005515
Phco4g02054 674 ProSiteProfiles Ankyrin repeat region circular profile. 224 246 - -
Phco4g02054 674 Pfam Ankyrin repeats (3 copies) 193 284 IPR002110 GO:0005515
Phco4g02054 674 MobiDBLite consensus disorder prediction 655 674 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02054 Phco-Chr4 40709563 40712391 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02953 2 58436763 58439368 Phco4g02054 4 40709563 40712391 PCT