Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02029 ATGCCTGGTTTTGTGGCCGAAAATAAGAGATATACAGACCCAAAGATGTGTTTTCCCAATTTGGCCAACCATAATAAACCAACCCTTTCGAAAAGCAATCGTTTTGTGAGGTCTGAGGCTCTAGATGATGATGACGACGATAGTAGTATCCCCATTCTACCTGGGTTGCCTGATGATGTTTCAAAGCACTGCCTTGCACTTGTGCCTCGTTCTAACTTCCCTGCCATGGGCGGTGTAAGTAAGAGATGGAGAGGCTTTATTCGAAGCAAAGAATTTATAACCGTGAGAAAATTGGCTGGGATGCACGAGGAATGGCTCTATATCTTAACAGCCGGTAGTGAAGGAAAAGGGAGCCATTGGGAGGTCATGGATTGTCTGGGTCATAATCGCCGATCTCTTCCACCAATGCCTGGTCCAGCCAAGGCTGGCTTTGGGGTGGCAGTTCTCAATGGAAAGCTCCTTATTATGGCTGGTTGTTCATCAATTGATGGAACTGCATCTGTCTCAGAAGAGGTTTATCAATATGATTCTTGCCTTAACAGCTGGAGCAGATTATCAAACATGAATGTGGCTCGGTATGACTTTGCTTGTGCTGAAGTCAATGGCTTGGTTTATGCTGTTGGAGGCTACGGTGCAAACGGTGACAGTCTCTCCTGTGCAGAGGTGTATGATCCGGATACCAACAAGTGGATGCCAATAGAGAGCCTCCGTCGTCCGAGATGGGGTTGCTTTGCCTGTGGATTTGAAGGGAAGCTCTATGTCATGGGTGGAAGATCAAACTTTACAATTGGAAATTCCAAGTTTGTTGATGTGTACAACCCAGAGAAGCATGACTGGTGTGAGATGAAAAATGGGTGTGTGATGGTCACTGCTCATGCAGTGCTGGGAAAGAAGTTGTTCTGTATGGAGTGGAAAAACCAGCGGAAGTTAGCAATATTCAATCCAGAGGACAATTCATGGAAAATGGTACCAGTCCCTTTGACAGGGAGTTCAAGCATTGGTTTTCGGTTTGGGATATTGGATGATAAGTTGTTGCTGTTCTCACTGGAGGAAGAGCCTTCATATAGGACTTTGTTGTATGATCCAAGTGCAGCCCCAGGATCTGAATGGCAGACTTCTGATATAAGACCATCTGGTTTGTGCTTATGCAGTGTAACTATTAAGGCCTGA 1170 0.4547 MPGFVAENKRYTDPKMCFPNLANHNKPTLSKSNRFVRSEALDDDDDDSSIPILPGLPDDVSKHCLALVPRSNFPAMGGVSKRWRGFIRSKEFITVRKLAGMHEEWLYILTAGSEGKGSHWEVMDCLGHNRRSLPPMPGPAKAGFGVAVLNGKLLIMAGCSSIDGTASVSEEVYQYDSCLNSWSRLSNMNVARYDFACAEVNGLVYAVGGYGANGDSLSCAEVYDPDTNKWMPIESLRRPRWGCFACGFEGKLYVMGGRSNFTIGNSKFVDVYNPEKHDWCEMKNGCVMVTAHAVLGKKLFCMEWKNQRKLAIFNPEDNSWKMVPVPLTGSSSIGFRFGILDDKLLLFSLEEEPSYRTLLYDPSAAPGSEWQTSDIRPSGLCLCSVTIKA 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02029 389 PANTHER OS02G0202900 PROTEIN 9 385 IPR045887 -
Phco4g02029 389 SUPERFAMILY Kelch motif 103 350 IPR015915 GO:0005515
Phco4g02029 389 SMART kelc_smart 251 296 IPR006652 GO:0005515
Phco4g02029 389 SMART kelc_smart 152 202 IPR006652 GO:0005515
Phco4g02029 389 SMART kelc_smart 203 250 IPR006652 GO:0005515
Phco4g02029 389 Pfam Kelch motif 142 189 IPR006652 GO:0005515
Phco4g02029 389 Pfam Kelch motif 191 236 IPR006652 GO:0005515
Phco4g02029 389 Pfam Kelch motif 240 284 IPR011498 GO:0005515
Phco4g02029 389 CDD F-box_AtAFR-like 52 96 - -
Phco4g02029 389 Gene3D - 89 387 IPR015915 GO:0005515
Phco4g02029 389 Pfam F-box domain 55 92 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02029 Phco-Chr4 40374125 40376038 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g02029 4 40374125 40376038 Phco4g02029 4 40374125 40376038 ECH
Phco2g02967 2 58533457 58534787 Phco4g02029 4 40374125 40376038 PCT