Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02967 ATGCCTTATTTTAGTGTTGGAAAGAAGAGATTTATCCAGCCAAATATGTGTTTCACTAATTTGACCAATCAAGATAAATCAACTCTTTCACAAAATGATAATTGTTTATTCCCCAATGCACTGAGTGAAGATTATAGCCCTATTCTACCTGGGCTGCCTGATGATGTGGCTGAGTATTGTCTGGCACTTGTGCCTCGTTCCAACTTCCCTGCTATGGGTGGTGTCTGTAAGAGATGGAGATCGTTTATGCGAAGCAAAGCATTCGCTACTGTGCGAAAATTGGCTGGGATGCTTGAGGAATGGATCTATTTCTTAACAACAGACTGTGAAGAAAAGGAAAGTCATTGGGAGGTTATGGACTGTCTCGGTCGTAAATGCCGATCTCTTCCACCAATGCCGGGTCCAGAAAAGGCTGGGTTTGGAGTGGTGGTTCTTAATGGAAAGCTTCTTGTTATGGCTGGTTATTCAGCTATTGAAGGAACTACCTTTGCCTCAGCAGAGGTTTACCAATATGATTCTTGCCTCAACAGCTGGGGCAGATTGTCGAACATGAATGTGGCTCGTTATGACTTTGCTTGTGCTGAAGTGAATGGCCTGGTTTATGCTGTTGGAGGCTATGGGGAGAATGGAGACAGTTTGTCCAGTGCTGAGATGTATGATCCAGATACTGACGAGTGGACACTGATAGAGAGCCTTCGCCGTCCGAGATGGGGTTGTTTTGCTTGTGGATTTGAGGGTAAGCTCTATGTAATGGGTGGAAGGTCAAGCTTCACTATTGGAAACTCCAAGTTTGTTGATGTATACAACCCTGAGAGACACAGCTGGTGTGAGATTAAGAATGGCTGTGTGATGGTCACAGCTCATGCAGTAGTAGGGAAGAAGCTGTTCTGCATTGAGTGGAAGAACCAGCGGAAGCTGGCTATATTCAGTCCAGAGGACAATTCATGGGAAATGGTACCAGTTCCATTGACAGGGAGCACAAGTGTTGGTTTTCGGTTTGGGATGCTGGATGAAAAGTTGCTGCTCTTCCCTCTGGTGGCAGAACATGCTTCTCAAACATTGTTGTATGATCCAAATGCAGCTTTGGGGTCAGAGTGGAGGACTTGTGACATAAAGCCATCTGGTTTGTGCTTGTATTGTGTAACAATCAAGGCATGA 1158 0.4499 MPYFSVGKKRFIQPNMCFTNLTNQDKSTLSQNDNCLFPNALSEDYSPILPGLPDDVAEYCLALVPRSNFPAMGGVCKRWRSFMRSKAFATVRKLAGMLEEWIYFLTTDCEEKESHWEVMDCLGRKCRSLPPMPGPEKAGFGVVVLNGKLLVMAGYSAIEGTTFASAEVYQYDSCLNSWGRLSNMNVARYDFACAEVNGLVYAVGGYGENGDSLSSAEMYDPDTDEWTLIESLRRPRWGCFACGFEGKLYVMGGRSSFTIGNSKFVDVYNPERHSWCEIKNGCVMVTAHAVVGKKLFCIEWKNQRKLAIFSPEDNSWEMVPVPLTGSTSVGFRFGMLDEKLLLFPLVAEHASQTLLYDPNAALGSEWRTCDIKPSGLCLYCVTIKA 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02967 385 Pfam F-box domain 51 85 IPR001810 GO:0005515
Phco2g02967 385 SUPERFAMILY F-box domain 46 89 IPR036047 GO:0005515
Phco2g02967 385 Pfam Kelch motif 236 279 IPR011498 GO:0005515
Phco2g02967 385 PANTHER OS02G0202900 PROTEIN 8 378 IPR045887 -
Phco2g02967 385 SUPERFAMILY Kelch motif 99 343 IPR015915 GO:0005515
Phco2g02967 385 SMART kelc_smart 148 198 IPR006652 GO:0005515
Phco2g02967 385 SMART kelc_smart 199 246 IPR006652 GO:0005515
Phco2g02967 385 SMART kelc_smart 247 294 IPR006652 GO:0005515
Phco2g02967 385 Gene3D - 85 381 IPR015915 GO:0005515
Phco2g02967 385 Pfam Kelch motif 138 185 IPR006652 GO:0005515
Phco2g02967 385 Pfam Kelch motif 187 232 IPR006652 GO:0005515
Phco2g02967 385 CDD F-box_AtAFR-like 48 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02967 Phco-Chr2 58533457 58534787 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02967 2 58533457 58534787 Phco4g02029 4 40374125 40376038 PCT