Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01997 ATGGCGGTGGAGAAGAGTGTTGAGATGGTGGCATTGGAGTGTCTGGGGAAAGGGTTCGATATAGCCAGTGATTTTCGGTTGAGGTTTGCAAAGGGGATTCCTGGAGGGAGGTTGGTAGTGCTTGATGAACATAACAAGAGGGATATATTGATTCCTGGAACCGGCGGAGTTACCATTAAAGCGGTTTCTGAGAATATTCGGTGTGATAAAGGGGATAGAATACGCTTCAAGTCTGATGTACTTGAATTCAACCAGATGTCCGAGTTGCTTAATCAGAAATCGGCAGTGCAGGGGAAAGTTCCTTCTGGGTATTTTAATGCGCTTTTTGATTTGACTGGTGATTGGTTTCGTGATGCTGCTGACACAAAATACCTTGCTTTTGATGGGTATTTCATTTCACTCTACTATTTGCACCTCACTGCTTCTCCACTCGTACTGCAAGAAGAGGTAAAGAAGTCTGTTCCGGCTCAGTGGGATCCAGCTTCATTGTCTAGGTTCATACAGACATATGGTACGCACATAATAGTGGGTATGGCTGTAGGAGGTCAAGATGTAATCTGTGTCAAACAAAAACATTCATCAAAAATTCCTCCTGGTGATCTCAGGAGACATTTAGAGGATCTTGGAGATTTTCTTTTCTCAGATGTGAGAAGCCCTTCTTTACTTCAGGGGAAGACAGCAGATGGAAAACAGAAGGTGCCCGAGGTCTTTAACCGTGTGATGCAATCTAACACAATGCAGTTCACTAGTATTTCAGAAACATCAAGCAAGGATGGCCTCACTATTATTTGTTCAAAAAGAGGAGGAGATATGTTCAAACACAGTCATTCAAATTGGCTTCAGACAGTGCCCTCTAACCCTGACGCAATCCTCTTCAAGTTTGTTCCTATTTCCTCACTTCTGACAGGAATTCCTGGAAGTGGATATCTTAGTCATGCAATCAATCTGTATCTACGATATAAGCCTTCTCTTGATGATTTACAGTACTTTTTGGAGTTTCAAATTCCGAGGCAATGGGCACCCATGTTTTGCGAGCTGCCACTCAGGCATCAGCGGAGAAAGACTGCTGCCCCTTCACTGCAATTTAGTTTCATGGGTCCGAAGCTTCATATCATCTCTACACAGGTGGTAAGTGAACAAAAACCTGTGGTTGGCATGCGCTTGTACTTGGAGGGAAGGAAATGTGACAGGCTTGCTTTGCATATACATCATCTTTCTAGCCTTCCAAATAAAATGATCCTCTCTTCAAGAACCTCAACCTCGAGCATGCCATCTATGTGGCGAGGATCCGATGATAACGATTTGAGTGATCAATTTCTGGAACGAATAAGATGGAAGAGATTCTCAAATGTGTGCACAGCAGTGGTTAAACATGACCCTAACTGGTTGAATAGTTCTGGAGGTGTTTATATTGTTACAGGAGCACAGCTCCTTAGCAAAGGGAGTTGGCCAAGGAATGTGCTTCACCTGCGTCTTCTCTTCACTCATATACCCAATTGCAGTATCCGGAAGTTAGAGTGGTCTGCTGCTCCAGAGGCTTCAAGAAAAACATCTTTTCTCACAAATTTGAGCACAACATTTTCATTCACACAGCATGGCAACTCTGGTCCTCCAAAGCAGGCTCCAACTGCACTCAATTCTGGTGTTTATCCAGATGGTCCACCTGTGCCCGTTCGATCCGGTAAACTACTTAAATACGTGGAGACAGCTGAGGTGGTGCGAGGTCCACATGATGCTCCTGGCCATTGGTTGGTAACTGCTGCTAAGCTTGTGACTGATGGTGGTAAGATTGGATTACAGGTTAAGTTTGCATTGCTAGATTATTGGTGA 1830 0.4404 MAVEKSVEMVALECLGKGFDIASDFRLRFAKGIPGGRLVVLDEHNKRDILIPGTGGVTIKAVSENIRCDKGDRIRFKSDVLEFNQMSELLNQKSAVQGKVPSGYFNALFDLTGDWFRDAADTKYLAFDGYFISLYYLHLTASPLVLQEEVKKSVPAQWDPASLSRFIQTYGTHIIVGMAVGGQDVICVKQKHSSKIPPGDLRRHLEDLGDFLFSDVRSPSLLQGKTADGKQKVPEVFNRVMQSNTMQFTSISETSSKDGLTIICSKRGGDMFKHSHSNWLQTVPSNPDAILFKFVPISSLLTGIPGSGYLSHAINLYLRYKPSLDDLQYFLEFQIPRQWAPMFCELPLRHQRRKTAAPSLQFSFMGPKLHIISTQVVSEQKPVVGMRLYLEGRKCDRLALHIHHLSSLPNKMILSSRTSTSSMPSMWRGSDDNDLSDQFLERIRWKRFSNVCTAVVKHDPNWLNSSGGVYIVTGAQLLSKGSWPRNVLHLRLLFTHIPNCSIRKLEWSAAPEASRKTSFLTNLSTTFSFTQHGNSGPPKQAPTALNSGVYPDGPPVPVRSGKLLKYVETAEVVRGPHDAPGHWLVTAAKLVTDGGKIGLQVKFALLDYW 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01997 609 Pfam MAC/Perforin domain 105 317 IPR020864 -
Phco4g01997 609 ProSiteProfiles Membrane attack complex/perforin (MACPF) domain profile. 1 331 IPR020864 -
Phco4g01997 609 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1 6 608 IPR044663 GO:0006952|GO:0012501|GO:2000031
Phco4g01997 609 SMART MACPF_8 122 319 IPR020864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01997 Phco-Chr4 39635024 39640352 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01997 4 39635024 39640352 Phco4g01997 4 39635024 39640352 ECH
Phco2g03002 2 58718823 58724005 Phco4g01997 4 39635024 39640352 PCT