Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g03002 ATGATGGCCATGGAAAGTGTGTTTCCGAATCCGATAGAGTGTCTGGGAAAAGGGTTTGATTTCACCAGTGATTTCAGGTTGAAGTTTGCCAAGGGAAAAGGAAGTGGAAGATTGGTGGTTGTTGACGAAGAGAACAAGAGGAACATTACTGTTCCTGGTACTGCTGCTATCATTCCCAATGTTTCCCAGGATATTAGCTGTGACAAGGGGGATCGCCTGCGCTTCAAATCTCATGTTCTTCAATTCAATCAGATGTCTGAGTTGCTAAATCAAAAGTCGGCAATACAAGGAAAAATTCCTTCTGGCTATTTTAATGCCCTCTTTGATCTGAGTGGTGATTGGTATCGTGATGCTCATAACATCAAGTATCTTGCTTTCGATGCTTATTTCATTTCCCTGTACTATTTGCACCTTACTGCTTCACACCTCATACTGCAAGAGGAAGTCAAAAAGTCTGTTCCAGCTCAGTGGGACCCGGCCTCATTAACCAGGTTCATTCAAACATATGGAACACACATAATAACAGGTATGGCTGTTGGAGGTCAAGATGTAATATGTGTCAAACAAAAGCATTCTTCAAAGGTTTCACCTGGTGATCTAAGAAGACATTTAGAGAATCTAGGAGATTTTTTGTTTCAAGATTTAAGAAGCCCTTCTCAACAACAGGCAAACACCTCCGCAGAAGCCAAACAAAAAGTTCCTGAGGTCTTCAATCAAGTGATGCAATCAAACACAACGCAGTTCACCAGCATCTCAGAAACCTCAAGCAAGGATGGCCTCAGTATCATCTGTTCAAAAAGAGGAGGAGATGTGTTCAAGCACGGTCACTCAAATTGGCTCCAGACAGTGGCTTCTAATCCTGAAGCTATCCTCTTCAAGTTTGTACCTATTTCCTCACTTCTCACAGGAATTCCTGGAAGCGGCTATCTTAGTCATGCAATCAATTTGTATTTACGCTATAAGCCCCCTCCCGAAGATTTACAATGCTTCTTGGAGTTTCAAATTCCAAGGCAATGGGCACCCATGTTTTATGAGCTACCTCTGAGGCATCAAAGGAAAAAGAGTGCTTCCCCTTCCCTGCAATTTGGTTTCATGTCTCCCAAACTTCATGTCAGTTCTGCACAGGTAGTGAGTGAAGAAAAGCCTGTGGTAGGCCTCCGTCTGTACTTGGAGGGAAGAAAATGTGATAGACTTGCAATACATGTACACCATCTTTCAAGCCTCCCAATCCCAAAGACAATGATCCACTCTTCAGGCGCATCTTTGTGGCGAGGATCTGATGATAATGAATCCTGTGACACCTTTCTGGAACCAATAAGGTGGAAGGGATTTGCAAACGTGTGCACTGCAGTGGTTAAACATGACCCTAACTGGTTGCATGAATCAGCTGTTGATGGGGGTGTTTACATTGTAACCGGTGCACAGCTCATTAGCAAAGGGAATTGGCCAAAGAATGTGCTTCACTTGCGCCTACAATATACCCACATATCCAATTGCAGTATCAGGAAGTCAGATTGGGGTGGTGCACCTGAGGCTTCAAGAAAATCATCTTTCCTCACAAATTTAAGCACAACATTTTCATTCACACAGCAAAGTGTCTCTGCTTCTCCTCAGAAGCAGCCTCCAACTGCACTTGACTCTGGTCTTTATCCAGATGGTCCACCTGTGCCTGTTCGTTCTGGAAAACTGCTTAAATACGTGGATACAAGCGAGGTTCTGCGTGGGCCACATGATGCTCCTGGACATTGGTTGGTAACAGCTGCTAAGCTTGTGACTGAGGGTGGTAAGATTGGATTACAGGTCAAGTTTGCACTGTTAGACTACTACTAG 1830 0.4388 MMAMESVFPNPIECLGKGFDFTSDFRLKFAKGKGSGRLVVVDEENKRNITVPGTAAIIPNVSQDISCDKGDRLRFKSHVLQFNQMSELLNQKSAIQGKIPSGYFNALFDLSGDWYRDAHNIKYLAFDAYFISLYYLHLTASHLILQEEVKKSVPAQWDPASLTRFIQTYGTHIITGMAVGGQDVICVKQKHSSKVSPGDLRRHLENLGDFLFQDLRSPSQQQANTSAEAKQKVPEVFNQVMQSNTTQFTSISETSSKDGLSIICSKRGGDVFKHGHSNWLQTVASNPEAILFKFVPISSLLTGIPGSGYLSHAINLYLRYKPPPEDLQCFLEFQIPRQWAPMFYELPLRHQRKKSASPSLQFGFMSPKLHVSSAQVVSEEKPVVGLRLYLEGRKCDRLAIHVHHLSSLPIPKTMIHSSGASLWRGSDDNESCDTFLEPIRWKGFANVCTAVVKHDPNWLHESAVDGGVYIVTGAQLISKGNWPKNVLHLRLQYTHISNCSIRKSDWGGAPEASRKSSFLTNLSTTFSFTQQSVSASPQKQPPTALDSGLYPDGPPVPVRSGKLLKYVDTSEVLRGPHDAPGHWLVTAAKLVTEGGKIGLQVKFALLDYY 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g03002 609 SMART MACPF_8 121 319 IPR020864 -
Phco2g03002 609 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1 5 608 IPR044663 GO:0006952|GO:0012501|GO:2000031
Phco2g03002 609 MobiDBLite consensus disorder prediction 531 553 - -
Phco2g03002 609 Pfam MAC/Perforin domain 104 317 IPR020864 -
Phco2g03002 609 ProSiteProfiles Membrane attack complex/perforin (MACPF) domain profile. 1 331 IPR020864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g03002 Phco-Chr2 58718823 58724005 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g03002 2 58718823 58724005 Phco4g01997 4 39635024 39640352 PCT