Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01608 ATGGCTGTGGATTCTGCAATTTCGTCCCCATTGGGTCCACCGGCGTGTGACAAGGACGCGAAGGCGCTGCGGTTCATTGAGGAAATGACCCGAAACGCCGACGCCGTCCAAGAGAGGGTGCTGGCGGAGATTGTCACGCGCAACGCCCACACAGAGTACCTTAAACGCTTCGAACTCGGCGCCGCCGCCGACCGTCAAACCTTCAAGTCTAAGATTCCCGTTATCTCTTACGAGGATGTCCAGCCCGAGATTCAACGCATCGCCAATGGCGACCGCTCCCCTATCTTGTCCGCTCATCCCATCTCCGAATTTCTCACCAGTTCTGGTACTTCAGCTGGAGAAAGAAAACTGATGCCCACAATTAAGGAAGAGTTGGATCGTCGCCAACTTCTATACAGCCTCCTAATGCCAGTTATGAACCTTTATGTGCCGGGCTTAGACAAGGGAAAGGGCCTGTACTTTTTATTCGTGAAGTCCGAAACAAGGACACCGGGTGGGTTACTGGCCCGTCCGGTTCTCACAAGCTACTACAAAAGTGACCATTTCAAGACCCGACCTTACGACCCTTATAATGTGTACACTAGTCCAAATGAAGCAATTCTCTGCCCCGACTCATTCCAAAGCATGTACACGCAAATGCTCTGTGGCCTCATAGAACGCAACCACGTCCTCCGCCTTGGCGCCGTCTTTGCCTCCGGCCTCCTCCGCGCCATCCGATTCCTCCAACTCCATTGGCCCCAACTCGTCCACGATATCCGATCTGGAACCCTAACTTCCCAAATCACCGACCCTGCAATAAGGGAATACATGGACAATAATGTGCTAAAACCCGACCCGAAATTGGCCCAGTTTATGACAGAAGAATGCTCCAAGGAGAATTGGGAAGGGATCATCACAAGAATTTGGCCCAACACAAAATACTTGGACGTGATCGTAACGGGAGCCATGGCCCAATACATTCCCACGCTTAACTATTACAGCGGAGGATTACCCCTTGCATGCACCATGTACGCTTCCTCGGAGTGCTACTTCGGATTAAACCTTAATCCAATGTGCAAGCCCTCTAAGGTCTCCTACACCATCATGCCAAACATGGCATATTTTGAATTCCTTCTCCACGATCCTATTTCTGGCTCTATCAGTTCAAAACTGGTGGATTTGGTCGATGTGGAGGTAGGAAAGGAATACGAGTTGGTAATCACCACCTATGCGGGACTCTACCGGTATCGTGTGGGGGACATCCTCCGAGTCACCGGATTCCACAACTCGGCGCCGCAATTCCACTTCGTGCGGCGGAAAAACGTGTTGCTGAGCATTGACTCCGACAAAACGGACGAGTCGGAGTTGCAGAATGGGATTGAGAATGCCTCGAGGCTCTTGGCTGAGTTCAATACGAGTGTGGTGGAATACACGAGTTATGCCGACACAACAACGATTCCGGGTCACTATGTTATTTACTGGGAGTTGTTGAGCAAGGACTCGGCGAACTCACCGAGTCACGAGGTGTTGAATCGGTGTTGTTTGGAGATGGAGGAGTCGCTGAACTCCGTGTACAGGCAGTGTCGTGTTGCGGACCATTCCATTGGGCCATTGGAAATACGCGTTGTGAAGAATGGAACCTTCGAGGAGCTTATGGATTATGCAATCTCAAGAGGTGCTTCAATAAATCAATACAAGGTACCTAGGTGTGTGAATTTCACACCCATAGTGGAGTTATTGGACTCTAGGGTTGTGTCCGTGCATTTTAGCCAAGAATTGCCACATTGGACCCCTGAAAGGAGAAGGTGA 1788 0.5067 MAVDSAISSPLGPPACDKDAKALRFIEEMTRNADAVQERVLAEIVTRNAHTEYLKRFELGAAADRQTFKSKIPVISYEDVQPEIQRIANGDRSPILSAHPISEFLTSSGTSAGERKLMPTIKEELDRRQLLYSLLMPVMNLYVPGLDKGKGLYFLFVKSETRTPGGLLARPVLTSYYKSDHFKTRPYDPYNVYTSPNEAILCPDSFQSMYTQMLCGLIERNHVLRLGAVFASGLLRAIRFLQLHWPQLVHDIRSGTLTSQITDPAIREYMDNNVLKPDPKLAQFMTEECSKENWEGIITRIWPNTKYLDVIVTGAMAQYIPTLNYYSGGLPLACTMYASSECYFGLNLNPMCKPSKVSYTIMPNMAYFEFLLHDPISGSISSKLVDLVDVEVGKEYELVITTYAGLYRYRVGDILRVTGFHNSAPQFHFVRRKNVLLSIDSDKTDESELQNGIENASRLLAEFNTSVVEYTSYADTTTIPGHYVIYWELLSKDSANSPSHEVLNRCCLEMEESLNSVYRQCRVADHSIGPLEIRVVKNGTFEELMDYAISRGASINQYKVPRCVNFTPIVELLDSRVVSVHFSQELPHWTPERRR 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01608 595 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 20 586 IPR004993 -
Phco4g01608 595 Pfam GH3 auxin-responsive promoter 26 566 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01608 Phco-Chr4 15498551 15501903 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01608 4 15498551 15501903 Phco8g01291 8 13517921 13528414 PCT