Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01021 ATGTCTGCCACGTGGACGGTGAAGATGTTCTCAGAGAATAGGACTATGATTAAACTTTTTAAAGTAAAGGAAAAGCAGAGAGAACTTGCAGAAAATGCAAGTGGTGGACCACCCGTTAAGAAGCAAAGTGCTGGCGAGTTGCGTCTTCACAAAGACATAAGTGAGCTGAATCTACCACAATCTTGTACCATACATTTCCCCAATGGAAAAGATGACCTGATGAACTTCGAAGTTTCAATTCGACCTGATGACGGATATTACTTAGGTGGCACATTTTTGTTTTCCTTTCAAGTGTCTCCCATCTATCCACATGAAGCGCCAAAGGTTAAGTGCAAGACAAAGGTCTATCATCCAAATATTGACTTGGAAGGAAATGTTTGTCTCAACATCTTACGAGAAGATTGGAAACCTGTCCTTAATATAAACACTGTCATCTATGGCTTGTATCATCTCTTCACGGAACCAAATTACGAGGATCCACTGAATCACGATGCCGCTGCTGTGTTGAGAGAGAACCCAAGGTTGTTTGAATCTAACGTGAGGAGGGCAATGTCTGGAGGGTATGTGGGGCAAACCTTTTTTCCTCGTTGTATTTAG 597 0.4204 MSATWTVKMFSENRTMIKLFKVKEKQRELAENASGGPPVKKQSAGELRLHKDISELNLPQSCTIHFPNGKDDLMNFEVSIRPDDGYYLGGTFLFSFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLYHLFTEPNYEDPLNHDAAAVLRENPRLFESNVRRAMSGGYVGQTFFPRCI 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01021 198 FunFam NEDD8-conjugating enzyme Ubc12 40 198 - -
Phco4g01021 198 CDD UBCc 48 182 IPR000608 -
Phco4g01021 198 Gene3D Ubiquitin Conjugating Enzyme 40 198 IPR016135 -
Phco4g01021 198 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 44 189 IPR000608 -
Phco4g01021 198 Pfam Ubiquitin-conjugating enzyme 48 183 IPR000608 -
Phco4g01021 198 SMART ubc_7 47 189 - -
Phco4g01021 198 SUPERFAMILY UBC-like 37 196 IPR016135 -
Phco4g01021 198 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 72 174 - -
Phco4g01021 198 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 116 131 IPR023313 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01021 Phco-Chr4 8098044 8101760 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01021 4 8098044 8101760 Phco8g00505 8 4937701 4940784 PCT