Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00959 ATGAGAACGGATATTGTTGAAGGGGAGGCCTTACTAAATCCCATCTCCTTTAAGGTGCATAGTAAAATCTGCATAGAACTTGCAAAATTAGTGGATAGAATCTCAATAATACTTCCAGACATAGAGGCGACACGGCCTGGATTCTCGTTGGGAATAGAGTCTTTGTGTTTGCTGAACAACGCAATTGAAAAGGCTAAAGTAATTCTGCAGCATTGCTCTGAATGCAGCAAACTCTATCTGGTTATGACAGGGGATACAGTACTCTCAAGATGCCTAAAGACAACAAGATCATTAGAGAAAAGCTTAATCCAAATTCAGAATATGGTTCCTGTTATGTTGGCTGTGAAGGTTTCTGGAATAATTCATGATATTGAGTGTACGAGATTTGTTCTGGACCCCGATGAAGAAGAGGCTGGGAGGGTTGTGAGAGAGTTGCTCACTTCAACCTCAGATTCAGTCAACGATTCTGAAGTTAAAGCTCTTCAGTCTGTAGCATCTCGACTGAAAATAACATCCCGGAAGGCCATCGTAACAGAGCAACGATCTATTAGGAAGTTGTTGGATAAACTTGGACCACAAGACCTGCCGAAGAAAAGGATACTGAAATATCTTCTGCATCTACTGAAAAAGCATGCAAAGCTCCTGGTGGTAGAACATGAGGAGAGGGTCTATTCTCCCGAAGAACAAGTTGAAACACAGAACTCTAGTCACGATTCTCTACGAAGCCATCATGTGGAATCAGACCAAAGCTTAAACTACGGTCAGTATGTAACTCACACCAGTGAGTTGGGTGGAGTTGAACCCCCTGAGCAATTTAAGTGCCCAATATCCTCAAGGTTGATGTATGATCCTGTTATCATTGAGTCAGGAGAAACATATGAAAGGATGTGGATAACAAAGTGGTTTGATGAGGGTAATGACATATGCCCCAAAACAAGAAAGAAACTAGTCCATACGGCTTTAACTCCAAACGTGTCCATGAAGAACCATATATCAAACTGGTGCAGAAAAAATGAAGTCTCCATTCCAGATCCTAGTAGGCATGCAGAAGATATTCGCTCATGGGAAGCTTCAAGCACTTCCATTAATAGTATAGGAAGTTATTTCAACAACTTCAACTCGCCAGTGGATCTCAGTAACATGTCAATTGGGTCACTTGATACTAGTTTTTGTTCAGATGTCTCGCATGGTAAGACCACTCGTGGCTCTACGTTGATCAAGAGTAGTGACAATTCTGAAAGACATCAAGTTCATGCAGAGATACATGATAGTGATTTGATGCTCTTGCCTCAACTCCGTGATCTTCAATGGGAATCTCAATGCAAGGTCATTCAAGACCTGAAAGATCACTTGAAAAGCAATAGCCAAGCTTTTGTTTCTGTATCAGCAGAGAATTTGGTTGAACCACTCCTCAGATTTCTGAGCAATGCATATGATCTGCGTGATGTTCAAGCCTTGAGAGCTGGAACTCAGCTTCTGTTGGACTTTGTCAACAACTGCAGAAATGGTAATACTACTTTGAATGATGAGGCGTTCATTATGTTGGCAAGTTTTCTTGATTCAGAAGCGATAGAAGAAATTCTTGTCATACTGGAAGAACTGTCTGGATATCGGTTTAGTAAACCTAAAATTGCAGCATCGAGTGCTCTCAATTCAATTTTAAACATACTTGATTCCGAAAACAAAGGTTTCCAACAACGAGCCATTAGAATAATGTACAATTTGTCTTTCATTAGTGAAGTCTGTCCCAGCATGCTATCACTCAAGTGCATCCCAAAATTGCTGCCATTTTTCAAAGACAGAACCCTTTTGAGATACTGCATATATATATTGAAAAATCTGTGTGATACTGAAGAGGGTAGGATTTCTGTTGCTGAAACAAAGGGATGCATAACTTCTGTGGCTGAAATACTTAATTCAGGCAATAATGAAGAACAAGAACATGCACTGGCAGTTCTAGTCTCTCTATGCTCTCATGTGGATTATAGTAAGTTAGTAATGAGAGAGCATGAGAATATCATAACTTCTCTTTTCTTGATCTCCCAGAATGGAAACGATAAAGGAAAGAAAAGTGCGTTTGAATTGATCCATCTTTTGAATTATGTCAACATTGTTGACAATAAAGGTTGCCCTGAACCAAATATCAGCAACTCTTGTCGAGATTCCAACAGTCACCCACCTGAAGAAAGTAGACCATCAAAGAGATCCACGTTTTTGAAGAAACTATCACCATTTTCAAAGTCCAGTTCACATGCATCAAAAACCAAAAGATGA 2274 0.3993 MRTDIVEGEALLNPISFKVHSKICIELAKLVDRISIILPDIEATRPGFSLGIESLCLLNNAIEKAKVILQHCSECSKLYLVMTGDTVLSRCLKTTRSLEKSLIQIQNMVPVMLAVKVSGIIHDIECTRFVLDPDEEEAGRVVRELLTSTSDSVNDSEVKALQSVASRLKITSRKAIVTEQRSIRKLLDKLGPQDLPKKRILKYLLHLLKKHAKLLVVEHEERVYSPEEQVETQNSSHDSLRSHHVESDQSLNYGQYVTHTSELGGVEPPEQFKCPISSRLMYDPVIIESGETYERMWITKWFDEGNDICPKTRKKLVHTALTPNVSMKNHISNWCRKNEVSIPDPSRHAEDIRSWEASSTSINSIGSYFNNFNSPVDLSNMSIGSLDTSFCSDVSHGKTTRGSTLIKSSDNSERHQVHAEIHDSDLMLLPQLRDLQWESQCKVIQDLKDHLKSNSQAFVSVSAENLVEPLLRFLSNAYDLRDVQALRAGTQLLLDFVNNCRNGNTTLNDEAFIMLASFLDSEAIEEILVILEELSGYRFSKPKIAASSALNSILNILDSENKGFQQRAIRIMYNLSFISEVCPSMLSLKCIPKLLPFFKDRTLLRYCIYILKNLCDTEEGRISVAETKGCITSVAEILNSGNNEEQEHALAVLVSLCSHVDYSKLVMREHENIITSLFLISQNGNDKGKKSAFELIHLLNYVNIVDNKGCPEPNISNSCRDSNSHPPEESRPSKRSTFLKKLSPFSKSSSHASKTKR 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00959 757 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 266 342 IPR013083 -
Phco4g00959 757 PANTHER U BOX DOMAIN-CONTAINING 22 707 - -
Phco4g00959 757 SUPERFAMILY ARM repeat 428 699 IPR016024 -
Phco4g00959 757 MobiDBLite consensus disorder prediction 715 757 - -
Phco4g00959 757 Gene3D - 427 701 IPR011989 -
Phco4g00959 757 Pfam U-box domain 269 339 IPR003613 GO:0004842|GO:0016567
Phco4g00959 757 ProSiteProfiles U-box domain profile. 267 341 IPR003613 GO:0004842|GO:0016567
Phco4g00959 757 SMART Ubox_2 271 334 IPR003613 GO:0004842|GO:0016567
Phco4g00959 757 SUPERFAMILY RING/U-box 258 345 - -
Phco4g00959 757 CDD RING-Ubox_PUB 269 321 IPR045210 -
Phco4g00959 757 Pfam Kinesin-associated protein (KAP) 482 657 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00959 Phco-Chr4 7572214 7575956 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00959 4 7572214 7575956 Phco4g00959 4 7572214 7575956 ECH
Phco8g00474 8 4474757 4478347 Phco4g00959 4 7572214 7575956 ECH
Phco4g00959 4 7572214 7575956 Phco8g00474 8 4474757 4478347 PCT