Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00791 ATGAAGTTAGACACTACCTTCTGCTTTGCCTTAGTTTATATTTTGCTGGTAACCTCACCAGAGTTTCCTAGTGTCGTTGGAGACGATGTTGGCAGCATCATTAGCGAATCTTTATTTGAACAATTGCTGAAACACCGAAACGATGCAGTTTGTGAGGGTAAAGGGTTCTACACCTACAATGCTTTTCTCACAGCAGCAAGTTCCTTTGGTGCTTTTGGCAACACAGGTGATTTGGACACTCGCAAGAGGGAGCTTGTAGCTTTCCTAGCCCAATCCTCTCACGAAACCACAGGAGGAGCACCAACTTCACCAGATGGACCATATGCATGGGGTTACTGCTTTGTGACAGAAAGAGATAAATCCAACAACTATTGTGATGGGAAGGCACCATGTACCCCAGGAAAATCTTATTATGGTAGAGGGCCCCTTCAATTGACACACAACTACAACTATGATCTAGCTGGGAATGCCTTAAAATTGGACTTGATAAACAATCCAGACTTGGTAGCCCAAGAAGCAGTGATATCATTCAAGGCAGCTATATGGTATTGGATGACACCACAGAGTAATAAACCTTCATGCCACGAGGTGATCACTAATGCGTGGACACCATCTGCTACTGACATGGCAGCTAACAGAGTTCCAGGTTATGGTGTAATTACCAACATCATCAATGGTCGATTTGAATGTGGGAATGGTCCCACTTCAAGCTCAGATAACAGGATCGGGTTTTATAAAAGCTTCTGTGACATTCTGGGACTCACACATGGTGCCAACTTGGAATGTAGTAACCAAAGGCCCTTTTCCTCATAA 813 0.4391 MKLDTTFCFALVYILLVTSPEFPSVVGDDVGSIISESLFEQLLKHRNDAVCEGKGFYTYNAFLTAASSFGAFGNTGDLDTRKRELVAFLAQSSHETTGGAPTSPDGPYAWGYCFVTERDKSNNYCDGKAPCTPGKSYYGRGPLQLTHNYNYDLAGNALKLDLINNPDLVAQEAVISFKAAIWYWMTPQSNKPSCHEVITNAWTPSATDMAANRVPGYGVITNIINGRFECGNGPTSSSDNRIGFYKSFCDILGLTHGANLECSNQRPFSS 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00791 270 Gene3D Endochitinase, domain 2 116 171 - -
Phco4g00791 270 PIRSF Endochitinase 7 269 IPR016283 GO:0004568|GO:0005975
Phco4g00791 270 PANTHER CHITINASE-RELATED 28 266 - -
Phco4g00791 270 FunFam Endochitinase (Chitinase) 116 171 - -
Phco4g00791 270 ProSitePatterns Chitinases family 19 signature 1. 51 73 IPR000726 GO:0004568|GO:0006032|GO:0016998
Phco4g00791 270 CDD chitinase_GH19 34 262 - -
Phco4g00791 270 Pfam Chitinase class I 33 262 IPR000726 GO:0004568|GO:0006032|GO:0016998
Phco4g00791 270 SUPERFAMILY Lysozyme-like 29 269 IPR023346 -
Phco4g00791 270 Gene3D - 38 268 - -
Phco4g00791 270 ProSitePatterns Chitinases family 19 signature 2. 175 185 IPR000726 GO:0004568|GO:0006032|GO:0016998
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00791 Phco-Chr4 6107859 6108944 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00791 4 6107859 6108944 Phco8g00343 8 3182244 3183444 PCT