Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00685 ATGGGGTCCAGTGGCAGCAAAGCCACGTCATCGTCGTCGTCTTCGGGGAGTTTCAGGAAGGGTCGATCTAAGGGGCACAGAGGTTTCCCGTCTTATTGTCTGGGAACGTCGTCTGGATCTCGTGACATTGATAGTGACGACCAGGTTTGTGATCAGAATAAAGTAAATGGAGATGATGTGACATACACCAGTGGCAATGAAATAGACTCAGATGAAGGGAAGACAGAGTCTTTTAGAAAGGTGAAGCCGGATAAATCTGATGAAGTGCCTTCTAACATTGACCTTGAGGAGTGGCGTCACAGTGCATCCAGAACTGGTAGCAGCTCTGCACATTCTTCTTCAAATCAGTCCTTGAACCCCTCAAGTCGGTTCCTATCTCGCTTTAGCCTTGTTCCTGGTAATATAAGCTTCAGACTTAGTAGAACCACAAGTTTGGGGTCATCTAGGCCTTGCCCGGTTTCTTCAACAAGTCTCTCAATATATGATGAAGGTGAGCTTAGTTTGCATCCAGGGCCTCCTGGCAGCTTGATTAATAGAAATGAAACTCAACACCGTAGTGATTTGCTCAATGCATCTTTTGTTAGTCAAGTGCCTAGGCAGTGTCATGAAGAAACCTCTAATAGTTTACGACCTAATGCCCTGCCATTGGTTTCACCTGGTAATTTCGTTGGCAGTCGCCCACTTTCTTCTGTCCAGGATGTGGTGAGAGGTGGAACTGTTGCAAGAGAAGTGCCTGATGTCAACATGTTTTCTCCAAGAATTCATACTGACACAGAAAATATTGAGACTAGACATACTGATAGAAGAAATGGAGCTCGAGAACCTGCTGAACGTAATGTTCGTTTTAGCCGAACTTTAAGTGTTGGAAGGCTCCGTGACAGAGTTCTCCGGCGATCAACGTTGTCAGACTTCACCTTTTGCCCTATGCAACGAGAGAGAGAAGCAAGAGATGCTGGTCAAGAGAATGGAAGACGAGTGGGGGATAGAGACACAAGAGTGTCATCAACTGGTCGTAATGCTTCAAATTCTTCTACACCTAGATATCCTCTGCCCAGTACACCAAGCTCCTTGTTTGGCATCCAAGACTATGAAGTTGAGCCGTCACGTTCTAGAGAAACTAGGTATCAGGATCTGCTGGAACATAGGTCCAATTTCCTGGAACGGAGAAGAAGAATACGGTCCCAGGTCCGTGCTCTTCAGCGGTTGGGTAGCCGGTTTGAAAATCTTTCTGGACATGAAAGATCATGTATCTTATCTGGTCAACATAGAAACGGTCGTTGTGCATGCAGAACCAATAGTCGTGATACCAATTCAAATGATGATACCAATGCTAGAGCTAGCATATCAAGAATTGTTATGCTAGCAGAAGCCTTATTTGAAGTTCTGGATGAAATTCACCAGCAATCTGTGGTTTTATCTTCTCGCCCTTCTGTGTCATCTATTGGTTCCGTTCCTGCACCTAATGAAGTTGTGGAATCCTTGCCTGTCAAATTATACAAAAAGTTGCACAAACATCAAGAAGAACCTGTACAATGTTATATATGCCTTGTGGAGTATGAGGATGGAGACAGCATGAGAGTTCTGCCTTGTCATCATGAATTTCATACAACATGTATAGACAAGTGGCTGAAGGAGATTCACAGGGTGTGCCCGCTATGTCGAGGGGATATCTGTGTATCCGATTCACTGCCAAGGGAGAACTAA 1704 0.4484 MGSSGSKATSSSSSSGSFRKGRSKGHRGFPSYCLGTSSGSRDIDSDDQVCDQNKVNGDDVTYTSGNEIDSDEGKTESFRKVKPDKSDEVPSNIDLEEWRHSASRTGSSSAHSSSNQSLNPSSRFLSRFSLVPGNISFRLSRTTSLGSSRPCPVSSTSLSIYDEGELSLHPGPPGSLINRNETQHRSDLLNASFVSQVPRQCHEETSNSLRPNALPLVSPGNFVGSRPLSSVQDVVRGGTVAREVPDVNMFSPRIHTDTENIETRHTDRRNGAREPAERNVRFSRTLSVGRLRDRVLRRSTLSDFTFCPMQREREARDAGQENGRRVGDRDTRVSSTGRNASNSSTPRYPLPSTPSSLFGIQDYEVEPSRSRETRYQDLLEHRSNFLERRRRIRSQVRALQRLGSRFENLSGHERSCILSGQHRNGRCACRTNSRDTNSNDDTNARASISRIVMLAEALFEVLDEIHQQSVVLSSRPSVSSIGSVPAPNEVVESLPVKLYKKLHKHQEEPVQCYICLVEYEDGDSMRVLPCHHEFHTTCIDKWLKEIHRVCPLCRGDICVSDSLPREN 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00685 567 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 566 - -
Phco4g00685 567 Pfam Ring finger domain 511 554 IPR001841 -
Phco4g00685 567 MobiDBLite consensus disorder prediction 54 68 - -
Phco4g00685 567 MobiDBLite consensus disorder prediction 1 19 - -
Phco4g00685 567 MobiDBLite consensus disorder prediction 102 121 - -
Phco4g00685 567 FunFam Putative RING zinc finger domain superfamily protein 481 559 - -
Phco4g00685 567 MobiDBLite consensus disorder prediction 69 101 - -
Phco4g00685 567 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 475 559 IPR013083 -
Phco4g00685 567 MobiDBLite consensus disorder prediction 333 359 - -
Phco4g00685 567 ProSiteProfiles Zinc finger RING-type profile. 512 554 IPR001841 -
Phco4g00685 567 MobiDBLite consensus disorder prediction 312 332 - -
Phco4g00685 567 MobiDBLite consensus disorder prediction 1 121 - -
Phco4g00685 567 MobiDBLite consensus disorder prediction 312 359 - -
Phco4g00685 567 SMART ring_2 512 553 IPR001841 -
Phco4g00685 567 SUPERFAMILY RING/U-box 490 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00685 Phco-Chr4 5178404 5182469 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00685 4 5178404 5182469 Phco4g00685 4 5178404 5182469 ECH
Phco4g00685 4 5178404 5182469 Phco8g00241 8 2273724 2277700 PCT