Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00357 ATGAGGCACCCACTCTACCGCGGAATCCGTTCCCGGGGAAGAAAATGGGTCTCCGAAATCCGGGAGCCGCGCAAGGCCTCCCGCATATGGCTCGGCACCTTCCCCACGCCGGAAATGGCCGCCGCCGCCTACGACGTCGCAGCATTGGCCTTGAAAGGTGACGGCGCTGTTCTCAACCTCCCTCACTCCGTTAGCAAGTATCAAATCCCTGCAACCAACTCTCCTGCGGATATCCGCACTGCTGCCTCCGCTGCAGCCGCAATGATGAAGGCTGAAACTGAAGCTTCCCACAACACTGCATCACAAACTGAAGCTACCCACACCAATGCGCCAAATTGGTGGTTTGAAAATAATTTCTTGGACGAGGAAGCCATTTTCGGCATGCCAAGTCTGCTGGTGGACATGGCCGGCGGAATGCTTCTGTCGCCTCCCAGAATGAGCCCGCCACCGTCCGATAACTCGCCGGAGAAACAAGCTGCAGAAACTTTGTGGAGTTATTTTTGA 504 0.5615 MRHPLYRGIRSRGRKWVSEIREPRKASRIWLGTFPTPEMAAAAYDVAALALKGDGAVLNLPHSVSKYQIPATNSPADIRTAASAAAAMMKAETEASHNTASQTEATHTNAPNWWFENNFLDEEAIFGMPSLLVDMAGGMLLSPPRMSPPPSDNSPEKQAAETLWSYF 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00357 167 SUPERFAMILY DNA-binding domain 5 63 IPR016177 GO:0003677
Phco4g00357 167 ProSiteProfiles AP2/ERF domain profile. 5 61 IPR001471 GO:0003700|GO:0006355
Phco4g00357 167 MobiDBLite consensus disorder prediction 142 167 - -
Phco4g00357 167 CDD AP2 4 63 IPR001471 GO:0003700|GO:0006355
Phco4g00357 167 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 2 166 IPR045277 GO:0003700
Phco4g00357 167 SMART rav1_2 5 67 IPR001471 GO:0003700|GO:0006355
Phco4g00357 167 Pfam AP2 domain 4 53 IPR001471 GO:0003700|GO:0006355
Phco4g00357 167 Gene3D AP2/ERF domain 5 63 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00357 Phco-Chr4 2282115 2282618 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phco4g00357 AP2 1.2e-09 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00357 4 2282115 2282618 Phco4g00357 4 2282115 2282618 ECH
Phco8g00672 8 6735966 6736502 Phco4g00357 4 2282115 2282618 PCT