Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00352 ATGTGTGAGTTATCATCGTCTACCCGCACTTTGGGTGAGAGCAATGAGGGCCATTCACACACGCACACCACCAAAATTCAGGAGCCTGACATGTTAGCTCTTTTGATCCCCAAACCCCCAACAACATTCCAGCAAGCCCAAAAAAACCAAAAGCCCCATGAAAGCACCCATTTTTCCCTGGCCCTCAACGAAGCCAAATGCATAGCAAACACAGCATTACCCATGGTTCTCACAGGTCTATTACTCTACTCTCGTTCTGTGATCTCTATGTTGTTCCTTGGTCGTGCCGGTGACCTTGCCTTAGCTGGTGGTTCTCTCGCCATTGGATTCGCCAACATCACAGGTTACTCTATTCTCTCAGGCCTCGCCATGGGGATGGAGCCCATCTGCGTCCAGGCTTTTGGGGCCAAACGTTTCAAACTTTTGGGCTTTGCCATGCAGAGGACAATAGTCCTTCTTCTTTTAACTTCAATTTTTATATCCTTCTTGTGGCTCAACATGAAGAACATATTGCTCCTGTGTGGCCAACAAGAAGACATCGCCACTCAAGCTCAATCATTCATACTCTATTCTCTACCTGATCTCGTAGCACAATCATTGCTACACCCTCTGCGAATCTACTTACGAAGTCAATCCATAACCCTGCCTCTCACATACACTGCCTCTCTCTCTATTCTCCTTCACGTCCCCATCAACTACCTCCTCGTCTCTGTGTTCAAACTTGGAATCAAAGGCATTGCTTTAGGCGCTGTTTGGACGAATTTCAACCTCGTCTTTTCGTTGGTTCTCTACATCTGGGCCTCCGGCATATACAAGAAAACATGGACTCGTATTTCTTTGAAGGGCATCTTCTGCGGTTGGAAGGCGCTTTTGAATTTGGCAATTCCAAGTTGCATTTCCGTTTGCCTGGAATGGTGGTGGTACGAAATCATGATTTTACTATGCGGGTTATTGATCAATCCCCAAGCTACCGTTGCATCCATGGGGGTTCTGATTCAAACCACCGCTTTGATATACATTTTCCCATCTTCCCTGAGCTTTGCGGTTTCAGCACGTGTTGGGAACGAAGTGGGTGCGGAGAATCCCAAAAGGGCCAAACTTGCAGCACTCGTGGGGCTTTTTTTCAGTTACGTCATGGGATTGTCGGCCTTGTTTTTTGCTGTTTCGGTGAGGCACGTGTGGGCATCCATGTTCACACGTGACGTGGAGATCACTGCTTTGACGGCGATGGTGTTGCCCATCATTGGTCTCTGCGAGCTTGGAAATTGTCCTCAAACAACGGTCTGCGGCGTTCTGAGGGGAACCGCGAGACCGAAGTTGGGAGCCAATATAAATTTGGGTTGCTTTTATATTGTGGGAATGCCCATTGCGGTGTGGTTGAGTTTCTTTGCGGGCTTTGACTTCAAAGGCCTGTGGCTGGGTTTATTGGCCGCACAAGCCTCGTGCATGATCACCATGTTGTTCGTGCTGGCTCGCACCAACTGGGAGGATCAGGTCCACAGAGCCAAACAACTCACATCATCTGATGCTAGTGATCAGGAGGAACAGGAACACCATGACAATTCCTCAGCGGAGGAATGCTCTGATTCAAATGTTTGA 1599 0.4828 MCELSSSTRTLGESNEGHSHTHTTKIQEPDMLALLIPKPPTTFQQAQKNQKPHESTHFSLALNEAKCIANTALPMVLTGLLLYSRSVISMLFLGRAGDLALAGGSLAIGFANITGYSILSGLAMGMEPICVQAFGAKRFKLLGFAMQRTIVLLLLTSIFISFLWLNMKNILLLCGQQEDIATQAQSFILYSLPDLVAQSLLHPLRIYLRSQSITLPLTYTASLSILLHVPINYLLVSVFKLGIKGIALGAVWTNFNLVFSLVLYIWASGIYKKTWTRISLKGIFCGWKALLNLAIPSCISVCLEWWWYEIMILLCGLLINPQATVASMGVLIQTTALIYIFPSSLSFAVSARVGNEVGAENPKRAKLAALVGLFFSYVMGLSALFFAVSVRHVWASMFTRDVEITALTAMVLPIIGLCELGNCPQTTVCGVLRGTARPKLGANINLGCFYIVGMPIAVWLSFFAGFDFKGLWLGLLAAQASCMITMLFVLARTNWEDQVHRAKQLTSSDASDQEEQEHHDNSSAEECSDSNV 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00352 532 MobiDBLite consensus disorder prediction 503 525 - -
Phco4g00352 532 Pfam MatE 296 459 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Phco4g00352 532 Pfam MatE 74 234 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Phco4g00352 532 MobiDBLite consensus disorder prediction 503 532 - -
Phco4g00352 532 PANTHER MULTIDRUG RESISTANCE PROTEIN 61 495 - -
Phco4g00352 532 NCBIfam MATE family efflux transporter 74 472 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Phco4g00352 532 CDD MATE_eukaryotic 64 501 IPR045069 GO:0042910|GO:1990961
Phco4g00352 532 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00352 Phco-Chr4 2241253 2242851 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00352 4 2241253 2242851 Phco4g00352 4 2241253 2242851 ECH
Phco8g00671 8 6709826 6711436 Phco4g00352 4 2241253 2242851 PCT