Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00314 ATGGGATCTCTTAATCTGAAATGGACGCCAGGGTGCTTGGTTTTTGGGAAGGTGGAGTCAAGTTATGATAAGTTTAACCGCAAAGAGAGAAGAGGAGCAAGATTCAAAGGAGGGCGAAGATCTGTAATTGTTGCTACGGGGCCAGCCATAGACCAGGTTCCTGCTATTGTCCAAGAGCCCTTGTCAAAAGATCATCTTATTCACTACATGGCATCTGGTTGCAAGCCCAAACAAAACTGGAGAATAGGTACAGAGCACGAGAAGTTTGGTTTTGAGCGTAAAACTTTCCGTTCAATTAATTACAAACAATTATCAGCTTTGCTCAATGGCATTGCTGAGAGATTTGATTGGGAAAAAATAATGGAAGGTGACAACATCATAGGACTGAAAAATGACAAGCAAAACATATCATTAGAGCGTGGTGGTCAGTTTGAGCTTAGTGGTGCGCCTTTGAAAACGTTGCATCAAACTTGTGATGAGATTAATTCACATCTCTATCAGGCTAAAACTGTAGCAGATGAAATGGGAATTGGATTTTTGGGATTAGGTTATCAGCCTAAATGGAGATTGGAAGACATAATCAGAGTGCCTAAGGAACGGTATAACATTTTACAGAATCAGTTATGCAAATTTGGCTCGCCCGGAGTTGAAATATTGATCATGACATGCTCAGTTCAGGTGAACCTGGACTTCAGTTCGGAAGCAGACATGATCAAGAAAATGCGTGCCAGTATTGCTTTGCAGCCTTTAGCAGCAGCCTTATTTGCCAATTCACCTTTCAAGGATGGTGTTCCAAGTGCTTATCTCACCACCAGAAGCCATATTGGTGAGTTTGACAAACATCGCACTGGCATACTCCCCTTTGTTTTTTATGACAATTTTGGGTTTGAACAGTATGTTGATTATGCTCTTGATGTGCCAATGGTGTTTGTTTATCGCGGAAACAAGTACATTGACTGTCGTGATATGTCATTCCGGGACTTCATGGCAGGTAAACTCCCTGCCATTCCAGGTCAAGTGCCAACACTAGCTGACTGGGAAAATCATCTAACAACCATATTTCCTGAGGTCAGGCTAAAGAGATACATGGAAATGAGAGGTGCTGATAATGGTCCTCTTCACATGATGTGCGCTGTCCCGGCATTTTGGGTAGGTTTGCTGTATGATGAGGTTTCACTGCAAAATGTTTTAGACATGATTGCTGATTGGACCACTGAAGACTTACAGAATTTAAGGGATATGGTTCCCATAACTGGATTAAGGACTTCAATTCAAGGTAGATTGCTGAGACATATTGCAGAAGATGTGTTGAAGTGGGCAAAGGAGGGGCTGGACAGAAGATGCTTAAATGAATCCGTTTTCTTGGATCCATTGAAGGAAGTGGTCTTCACAGGTTTGACCCGAGCAGATAAGCTATTGGAGTTGTATCATAACAAGTGGGGAAAGAACATAGATCATGTGTTCAGAGAGTGCTGCTACTAA 1482 0.4211 MGSLNLKWTPGCLVFGKVESSYDKFNRKERRGARFKGGRRSVIVATGPAIDQVPAIVQEPLSKDHLIHYMASGCKPKQNWRIGTEHEKFGFERKTFRSINYKQLSALLNGIAERFDWEKIMEGDNIIGLKNDKQNISLERGGQFELSGAPLKTLHQTCDEINSHLYQAKTVADEMGIGFLGLGYQPKWRLEDIIRVPKERYNILQNQLCKFGSPGVEILIMTCSVQVNLDFSSEADMIKKMRASIALQPLAAALFANSPFKDGVPSAYLTTRSHIGEFDKHRTGILPFVFYDNFGFEQYVDYALDVPMVFVYRGNKYIDCRDMSFRDFMAGKLPAIPGQVPTLADWENHLTTIFPEVRLKRYMEMRGADNGPLHMMCAVPAFWVGLLYDEVSLQNVLDMIADWTTEDLQNLRDMVPITGLRTSIQGRLLRHIAEDVLKWAKEGLDRRCLNESVFLDPLKEVVFTGLTRADKLLELYHNKWGKNIDHVFRECCY 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00314 493 SUPERFAMILY Glutamine synthetase/guanido kinase 72 483 IPR014746 GO:0003824
Phco4g00314 493 NCBIfam glutamate--cysteine ligase 62 493 IPR011556 GO:0004357|GO:0006750
Phco4g00314 493 PIRSF GCL 48 493 IPR035434 GO:0004357|GO:0006750
Phco4g00314 493 Gene3D - 47 493 - -
Phco4g00314 493 Pfam Glutamate-cysteine ligase family 2(GCS2) 114 403 IPR006336 GO:0004357|GO:0042398
Phco4g00314 493 PANTHER GLUTAMATE--CYSTEINE LIGASE, CHLOROPLASTIC 38 493 IPR035434 GO:0004357|GO:0006750
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00314 Phco-Chr4 1990483 1993780 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00314 4 1990483 1993780 Phco4g03288 4 53404657 53412680 PCT