Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g02777 ATGAGAATAGGGTCTCCTCGTTCTTCTTCTTCGTCCTCCTCCGGTTGTTCGCATTTCTGGTCGTCGGCGCTTCGATCGAAGCGCCTCATCACGGCGGCGGAGAAGGCCTCCCGCGACAGCTCCGAATTCGGCCTCTCTCGCCGCCTCGGCGTCATCGACCTCGTACTCCTCGGAATCGGCGCATCCATCGGCGCAGGCATCTTCGTCGTCACCGGTACCGTCGCCCGCGACGCCGGACCCGGAGTGACGATAAGTTTTATACTTGCGGGAGCATCGTGTGTTATAAATGCACTCTGTTATGCTGAACTAGCTTCTCGATTTCCCGCTGTTGTTGGAGGAGCTTATCTATATACATACACAGCTTTTAATGAACTTACGGCTTTTCTTGTTTTTGGTCAATTGATGCTTGACTATCACATTGGAGCAGCTAGTATAGCAAGAAGCCTGGCAAATTATCTGATAAATATTCTAGAACTCTTCCCTGTTTTCAAGGATAACATTCCAAAATGGATTGGACATGGGGAAAGCATTGGAGATGTGTTATCCATCAATATCTTGGCTCCTATTCTGCTAATGCTTATCACTTTTGTTCTATGTCAAGGTGTTCGTGAATCGTCAGTTGTGAACTGTATCATGACAGTGACCAAGATAATCATTGTTATCATTGTCATTTTTGCTGGAGTATTTGAGGTTGATGTTTCCAACTGGTCTCCCTTTGCTCCAAATGGTTTAAAAGCTATATTTACAGGAGCTACAGTAGTCTTCTTTGCATATGTTGGTTTTGATGCAGTTGCCAATTCGGCTGAAGAATCTAAGAGGCCTCAGCGGGATTTGCCAATTGGCATAATAGGAAGCCTCTTAGTATGTATTGCATTGTACATTGGAGTATGCTTGGTGATTACTGGAATGGTTCCGTACAATCTTCTAGGAGAAGATGCTCCTTTGGCTGACGCTTTTACATCTAAGGGATTAAAATTTATTTCTGTTCTGATTAGCATTGGTGCTGTCGCCGGACTTACAACAACACTCCTTGTTGGTCTCTATGTTCAGTCTCGGCTATATCTTGGGCTTGGCAGGGATGGCTTACTACCCTCAATATTTGCAAAGGTTCACTCAACACGCCACACCCCTATTCATTCTCAGATCTGGGTTGGCTTGGTTGCCAGTGTTTTGGCTGGGCTGTTAAATGTGCATGTGCTCTCTCACATTCTTTCCGTCGGTACACTGACTGGATATTCAGTTGTCTCAGCATGTGTTGTTGTACTTCGCTGGAAGGATAAGACAAGTAGTCAAGTGTCATCTTCAGCTGAGCGGGAAGGTGTAATTTGCCTCATTGCCGTTGCTCTTTGTGGATTTGCTACTGGGCTCTTCTACCGATATGATGCTTCATTTATTTTTCTGATTCTCACTATAGTCATCGCAGCTGGTGCTTCTGTTGCTCTTGTTTTCCGCCAGGTTTACGCAGATACACCAGGGTTTTCCTGCCCAGGGGTTCCCATTCTGCCAAATATTTGCATCTTTTTCAACATGTTCTTATTTGCCCAATTACATCAAGAAGCGTGGATGAGATTTGTGATTCTTTGTATCGTCATGATTGGTGTTTATGCAATATATGGCCAGCATCATGCGAATCCCAGTGCAGAAGACAGTATCTATATTGAGGCACCTCAGGAAGAAGAAGCTCGATGA 1689 0.4512 MRIGSPRSSSSSSSGCSHFWSSALRSKRLITAAEKASRDSSEFGLSRRLGVIDLVLLGIGASIGAGIFVVTGTVARDAGPGVTISFILAGASCVINALCYAELASRFPAVVGGAYLYTYTAFNELTAFLVFGQLMLDYHIGAASIARSLANYLINILELFPVFKDNIPKWIGHGESIGDVLSINILAPILLMLITFVLCQGVRESSVVNCIMTVTKIIIVIIVIFAGVFEVDVSNWSPFAPNGLKAIFTGATVVFFAYVGFDAVANSAEESKRPQRDLPIGIIGSLLVCIALYIGVCLVITGMVPYNLLGEDAPLADAFTSKGLKFISVLISIGAVAGLTTTLLVGLYVQSRLYLGLGRDGLLPSIFAKVHSTRHTPIHSQIWVGLVASVLAGLLNVHVLSHILSVGTLTGYSVVSACVVVLRWKDKTSSQVSSSAEREGVICLIAVALCGFATGLFYRYDASFIFLILTIVIAAGASVALVFRQVYADTPGFSCPGVPILPNICIFFNMFLFAQLHQEAWMRFVILCIVMIGVYAIYGQHHANPSAEDSIYIEAPQEEEAR 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g02777 562 Pfam C-terminus of AA_permease 493 542 IPR029485 -
Phco3g02777 562 Gene3D Amino acid/polyamine transporter I 45 479 - -
Phco3g02777 562 Pfam Amino acid permease 49 457 IPR002293 GO:0016020|GO:0022857|GO:0055085
Phco3g02777 562 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 40 543 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g02777 Phco-Chr3 54147508 54152572 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g02777 3 54147508 54152572 Phco3g02777 3 54147508 54152572 ECH
Phco5g01741 5 53529946 53531634 Phco3g02777 3 54147508 54152572 PCT