Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g02604 ATGGGATTTCCGGTAGGGTATCCGGAAGTGCTGGTCCCCAAGCTCTTCCTCCACGCGCTCTCGCTCCTCGCGTGGCTCCGCTCGCTCGTCGCCGCGCTCTTCCGCCTCCTCCGCCTCTCCGACCTCCTCGACACCGACGCCGCCGCGCTCGCCTGGCCGCCGGAGTCCCCGCCGCAGCGCGCTCCTACTCTCTCCGCAGTCCTCATCCGCGAGTTTCTCCCCGTGGCAGCGTTCCGTGACCTCGACGGCGCCGGCGACTCCCCTCCATCGCCGACGGGATGCGCAGTGTGCCTGAGCGAGTTCTGCGCGGAGGAGGAGATCAGGTGCATGGCGAACTGCAAACACATGTTCCACCGCGCGTGCGTGGACCGTTGGATCGATCACGATCAGAAGACGTGTCCTCTGTGTAGGACGCCGTTCGTGCCCGAGCACAAGGTGGAGGAGTATAACCAACGACTATGGGCGGCTTCTGGTGTTTCGCAGTTTTACCAAGACGATTACACTCCTTCCCTCTGA 516 0.6434 MGFPVGYPEVLVPKLFLHALSLLAWLRSLVAALFRLLRLSDLLDTDAAALAWPPESPPQRAPTLSAVLIREFLPVAAFRDLDGAGDSPPSPTGCAVCLSEFCAEEEIRCMANCKHMFHRACVDRWIDHDQKTCPLCRTPFVPEHKVEEYNQRLWAASGVSQFYQDDYTPSL 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g02604 171 SUPERFAMILY RING/U-box 84 146 - -
Phco3g02604 171 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 61 142 IPR013083 -
Phco3g02604 171 SMART ring_2 94 136 IPR001841 -
Phco3g02604 171 ProSiteProfiles Zinc finger RING-type profile. 94 137 IPR001841 -
Phco3g02604 171 PANTHER RING ZINC FINGER PROTEIN-RELATED 25 157 - -
Phco3g02604 171 Pfam Ring finger domain 94 137 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g02604 Phco-Chr3 52678758 52679273 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g02604 3 52678758 52679273 Phco3g02604 3 52678758 52679273 ECH
Phco3g02604 3 52678758 52679273 Phco1g00746 1 6837898 6838401 PCT