Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00746 ATGGGTTTTCCGGTGGGTTACGCGGAGGTGTTCTTCCCCAACCCCTTCCTCCACACACTGGCCTTCCTCGGCCTCATCCGAAACCTCGTCTTCTTTCTCTTCCACCTCCTCGGACTCTCCGACTTCCTCGAAACCGAGGTCGCATGGCCAGACCCCCGCACCCCCGCCGCCACCGCCGCCGTCTCCAGGCCCCCCTCAGTGTCGGCGCTACTTATCCGGGACATCCTCCCCGTCGCCAAGTTCGGAGAGTCCGGAGAGAATTCCTGCGCCTGCGCCGTCTGTCTGTTCGAGTTCTCCGAGGAGGAGGAGATTCGGTGTATGCGGAACTGCAAACACATTTTCCACCGCATCTGCGTGGACCGTTGGATCGATCACGATCAGAAAACGTGCCCTCTATGTAGGACCCCCTTTGTGCCCGATGACATGCTTGATGATTACAATCAACGCCTCTGGGCTGCTTCTGGGATCAACGAGTTCTACGCCGATTACACTTCTTCCTTCTGA 504 0.5853 MGFPVGYAEVFFPNPFLHTLAFLGLIRNLVFFLFHLLGLSDFLETEVAWPDPRTPAATAAVSRPPSVSALLIRDILPVAKFGESGENSCACAVCLFEFSEEEEIRCMRNCKHIFHRICVDRWIDHDQKTCPLCRTPFVPDDMLDDYNQRLWAASGINEFYADYTSSF 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00746 167 ProSiteProfiles Zinc finger RING-type profile. 91 134 IPR001841 -
Phco1g00746 167 SUPERFAMILY RING/U-box 71 141 - -
Phco1g00746 167 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 59 139 IPR013083 -
Phco1g00746 167 SMART ring_2 91 133 IPR001841 -
Phco1g00746 167 PANTHER RING ZINC FINGER PROTEIN-RELATED 27 153 - -
Phco1g00746 167 Pfam Ring finger domain 90 134 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00746 Phco-Chr1 6837898 6838401 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g02604 3 52678758 52679273 Phco1g00746 1 6837898 6838401 PCT