Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g02540 ATGATTCTGACTGTTGCAAAGAAGGCAAACTCTACACAACATATGAATGTTCACCACCTATGTCCACCCACACCAACGCTTACCTCACTCTTAACAGTTTTCAGAAGGGTGGAGATGGTGGTGGCCCTTCAGAATGTGACAACCATTACCATTTCTGATGACACACCCGTGGTGGCACTGTCCACAGGGTGGTTCAACCACAAAAGCAGGTGCCTCCACAACATCACCATCAGTGGGAATGGTAGAAGTGTGGTGGCCATGGTGGTAGATGAGTGTGACTCAACTAAGGGATGTGATGCAGACCATGACTATCAACCTCCATGTCCCAATAACATTGTTGATGCTTCCAGGGCTGTCTGGAAAGCATTGGGAGTGCCCCCAAATGAATGGGGTGGCTTGGATATTACATGGTCTGATGCTTGA 423 0.4823 MILTVAKKANSTQHMNVHHLCPPTPTLTSLLTVFRRVEMVVALQNVTTITISDDTPVVALSTGWFNHKSRCLHNITISGNGRSVVAMVVDECDSTKGCDADHDYQPPCPNNIVDASRAVWKALGVPPNEWGGLDITWSDA 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g02540 140 PANTHER RIPENING-RELATED PROTEIN 2-RELATED 51 139 IPR039271 -
Phco3g02540 140 SUPERFAMILY Barwin-like endoglucanases 52 138 IPR036908 -
Phco3g02540 140 CDD DPBB_kiwellin-like 52 139 - -
Phco3g02540 140 Gene3D - 31 139 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g02540 Phco-Chr3 52034958 52035380 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g02540 3 52034958 52035380 Phco3g02540 3 52034958 52035380 ECH
Phco3g02540 3 52034958 52035380 Phco1g00797 1 7392600 7393166 PCT