Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00797 ATGAAGAGTGTTTTCACAAAATCATGCTCTTTGGCACTACTTTTTCTGCTACTAACAAGCTGCATGCATTCCGAAGCACAGCAATGTCGTCCAAGTGGAAGAATAAAAGGGAAAAAGGCTCCTGCAGGACAATGCAACCAAGAGAATGATTCAGACTGCTGCAAACAAGGGAAAATGTACACAACATATGAATGTTCCCCAGAAGTGAGTGGCAACACAAAGGCATATCTAACCCTTAACAGCTTTGAGAAGAATGGAGATGGGGGTGGGCCTTCAGAATGTGACAACCAGTACCATTCTGATGACACACCAATAGTTGCACTCTCCACTGGATGGTTCAACCACAAGAGCAGGTGCCACAACAAAATCACCATCCACGGCAATGGCAGGAGTGTGGATGCCATGGTGGTTGATGAGTGTGACTCCACCATGGGGTGTGATGCAGACCATGATTATCAACCTCCTTGTCCCAACAACATTGTTGATGCTTCAAAGGCTGTGTGGGAAGCCTTGGGTGTCCCTCATGACCAGTGGGGTGGATTACAAATTACTTGGTCTGATGCTTAA 567 0.4621 MKSVFTKSCSLALLFLLLTSCMHSEAQQCRPSGRIKGKKAPAGQCNQENDSDCCKQGKMYTTYECSPEVSGNTKAYLTLNSFEKNGDGGGPSECDNQYHSDDTPIVALSTGWFNHKSRCHNKITIHGNGRSVDAMVVDECDSTMGCDADHDYQPPCPNNIVDASKAVWEALGVPHDQWGGLQITWSDA 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00797 188 CDD DPBB_kiwellin-like 60 187 - -
Phco1g00797 188 PANTHER RIPENING-RELATED PROTEIN 2-RELATED 11 187 IPR039271 -
Phco1g00797 188 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Phco1g00797 188 SUPERFAMILY Barwin-like endoglucanases 69 186 IPR036908 -
Phco1g00797 188 Gene3D - 72 187 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00797 Phco-Chr1 7392600 7393166 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00797 1 7392600 7393166 Phco1g00797 1 7392600 7393166 ECH
Phco3g02540 3 52034958 52035380 Phco1g00797 1 7392600 7393166 PCT