Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g02526 ATGGATATGGCTTGTAGTTTGCCGCAGTCAAGAATGTTGCACGGAGGTGTGGGGACGAGTTACAGACACGGATCAGTTGGTCAGTTCGGTTGTTTTGATTTTAGAGGGCGAGGTTTTGGTCGTGCTGTTTTTGACAGCTCGAGAAGTGTTTCAAAATTTCGTGTTAGTGGGATGAGTGTTTCTGCTTGTTGGAGTAATTCCAGAGTGGTTACTGGTAGGGAGTTTAAAGTTTTGAATATTAAGAGAAGTTTGTCTTGTAAGAATAATAGTAATCTTTTTATGGGGTCTAGAGTGATTTGGTCGAAGTGCCAGGGTAATGATTCTTTAGCTTATGTTGCTGGCAACGGTCGGACTGTTGATTTTGTGGAAGGTTCAGGTGAGGATGCAGGATTAAGGCCTGTTTCTTGTGTTGAACTGGATGCACCTTTGGAAGAAGAAGGGCAAGCCGAAAGGAAAGAGGGAGGGAGTGAAATAGGAGCAGAGGAACTAAGTGTGGATCAATTGAAAGAACTATTGCAAAAGGCTAGGAAGGAGCTAGAAGTAGCTCAAATAAATAGTACCATGTTTGAGGAAAAGGTTAAAAAAATATCAGAGACTGCCATTTCTTTGCATGATGAAGCTGTGATTTCTTGGGATAATGTTAATTCTACCCTTGACACCATCAAAGAAATAGCTAATAAAGAGCTTATGGCCAAAGAAGCTTTCCAAAATGCAACAATGGCTCTTTCATTAGCTGAGGCAAGGCTTCAAGTAGCTGTAGAATCGTTGGAGCCTGCAAAAGAAGTTCCTGATTCAGCACAAGGTTCTAATGATAGCAATGGTGATAAGGACATGGAAAAAGAGGAGAAAGCTATTTTGTTTGCTCAAGAAGATATCAAGGAATGCCAGGCTAATTTAGCCAATTGTGAGGCCGAGCTGAGGCGCTTGCAAAATAGGAAGGAAGAGTTGCAGAAGGAAGTGAGCAAATTGCAAGAAATTGCTGAAACGGCTCAGCTGAATGCCGCGAAAGCTGAAGAGGATGTTACAAACATAATGCTTTTGGCTGAGCATGCTGTTGCCTTTGAACTGGAAGCAACAAAACGTGTAAATGATGCAGAGATTGCCTTACAGCGAGCAGATAAGTCTAATTCTAATACTGATACCATAGAAACTACCCAAGCACCTGATGTTGAGGCTATTCCTGAGGAGGAGAAAGTGGTTGACTGTTTTTCTGGTGATGTCACTGTTGAAAGAGACAAAGATTTATCAATTGATGATGAATCTTTGGTTGCAAATTTATCACCTGAAACACTATCTGATAAAGCCAACCAAATTTTAGAAGACAAAACACAGTCTGATTATTTAAGTGATAATGAGAATGCTGTGCAAACAAAAAAGCAGGAAACACAGAAAGATTTGACCAAAGATAGTTCACTCTTTGCTCCCAAGGCATTATTGAAAAAGTCTTCTCGATTCTTTTCTGCATCATACTTTTCTTTTACTGAAGATGGGAGTGAGTTCACACCAGCATCAGTCTTTCAGGGTGTTATACTATCTGTACGGAAGCAGTTGCCCAAGCTAATATTTGGGTTATTGTTAATGGGAGCAGGGGTTACCTTCTTTGCTAATAAAGTGGATAGGAATGCTCAGCTGCTTCCTCAGGCAGATGTTATCATGACCAGTGTTGAAGAAGTTTCCTCTAGTGCAAAGCCACTGGTTAGATACCTTCAGAAACTGCCCAAAAAAATCAAGAAAATTATTGCATCATTACCTCATCAAGAGGTGAATGAGGAAGAAGCCTCCCTATTTGACATGCTCTGGCTATTACTTGCAAGTGTTATATTCGTTCCAATATTTCAGAAAATCCCTGGAGGCAGTCCTGTTCTTGGCTATTTGGCTGCTGGTATCTTGATTGGGCCATACGGTCTCTCTATCATCCGTCACGTACATGGCACAAAAGCTGTAGCTGAATTTGGAGTTGTTTTCCTTCTATTCAATATTGGCCTGGAGCTCTCTGTTGAAAGGCTTAGCTCAATGAAGAAATATGTCTTTGGATTAGGCTCTGCACAGGTTTTGGCAACTGCTGTAGCTATTGGTTGGGTGGTTCATTTTATTTGTGGCCAACCTGTTCCTGCTGCTATTGTTGTTGGGAATGGCCTTGCATTATCATCCACTGCTGTTGTGCTGCAGGTGTTGCAGGAGAGAGGTGAGAGCACATCACGGCATGGCCGAGCTACTTTTTCTGTGTTACTCTTTCAGGATCTGGCTGTTGTGGTGTTGTTAATACTCATACCTCTTATTTCTCCTAATTCTTCCAAAGGAGGGGTTGGTTTTCAAGCTATTGCTGAAGCGCTTGGAATGGCTGCTGTTAAGGCAGCAGTTGCCATCACTGCCATAATTGCAGGGGGACGATTGCTCCTTCGACCAATATACAAGCAGGTTGCAGAAAATCAAAATGCTGAAATTTTCTCAGCCAATACACTCCTTGTTATTCTTGGCACTAGTCTTCTTACGGCCAGGGCAGGACTTTCCATGGCATTAGGAGCCTTTTTGGCTGGTTTACTGCTGGCAGAAACTGAATTTTCGTTACAGGTTGAATCTGACATTGCTCCATATCGTGGCCTTCTTTTGGGGCTATTCTTTATGACGGTTGGAATGTCAATTGATCCAAAACTTCTTGTATCAAACTTCCCAGTCATCGGAGTCACACTAGGACTCTTAATATGTGGCAAGACTATCTTGGTTTCTTTGATGGGTAGAATGTTTGGGATTTCCTTCATTTCTGCCATCAGAGCTGGTCTTCTTCTTGCTCCTGGTGGAGAGTTTGCATTTGTGGCTTTCGGTGATGCCGTTAATCAGGGCATAATGTCTTCCCAGCTGTCATCTTTGCTGTTTCTTGTTGTGGGCATTTCAATGGCCATCACACCATGGCTAGCAGCAGGAGGCCAGCTGATTGCTTCCCGTTTTGAGCAGAGTGATGTTAGAAGTTTATTACCTGTAGAAAGTGAGACGGATGATCTGCAAGATCATATCATTATTTGTGGATTTGGACGAGTGGGCCAGATCATTGCCCAACTTCTGTCTGAGCGTCTTATTCCGTTTGTCGCACTAGATGTAAGAAGTGATAGAGTGGCAGTTGGCCGAGGTCTGGGTCTTCCTGTGTACTTTGGGGATGCTGGTAGTAGAGAGGTTTTACATAAGCTTGGAGCTGAAAGGGCATGTGCTGCAGCAATAACACTTGATACACCTGGTGCAAATTATAGAACAGTCTGGGCTCTGAGCAAGTACTTCCCAAATGTGAAGACCTTTGTCCGTGCCCATGACGTTGATCATGGATTGAATTTAGAAAAGGCTGGAGCTACTGCTGTCGTCCCAGAGACCTTGGAACCAAGTCTTCAGCTAGCAGCTGCTTTGCTTTCTCAGTCCAAACTCCCCACATCGGAGATTGCAGCAACTATAAATGAATTCAGATCTCGACATCTGGCTGAGCTCACAGAGCTGTGTGAAGCAAGTGGAAGTTCTCTAGGTTATGGATTTAATAAAATTATGGGCAAACCAAAATCTCAATCAACAGATTCATTAGATGAGACCCCAGTTTCTGAAGGCACACTGGCAGTATGA 3600 0.4286 MDMACSLPQSRMLHGGVGTSYRHGSVGQFGCFDFRGRGFGRAVFDSSRSVSKFRVSGMSVSACWSNSRVVTGREFKVLNIKRSLSCKNNSNLFMGSRVIWSKCQGNDSLAYVAGNGRTVDFVEGSGEDAGLRPVSCVELDAPLEEEGQAERKEGGSEIGAEELSVDQLKELLQKARKELEVAQINSTMFEEKVKKISETAISLHDEAVISWDNVNSTLDTIKEIANKELMAKEAFQNATMALSLAEARLQVAVESLEPAKEVPDSAQGSNDSNGDKDMEKEEKAILFAQEDIKECQANLANCEAELRRLQNRKEELQKEVSKLQEIAETAQLNAAKAEEDVTNIMLLAEHAVAFELEATKRVNDAEIALQRADKSNSNTDTIETTQAPDVEAIPEEEKVVDCFSGDVTVERDKDLSIDDESLVANLSPETLSDKANQILEDKTQSDYLSDNENAVQTKKQETQKDLTKDSSLFAPKALLKKSSRFFSASYFSFTEDGSEFTPASVFQGVILSVRKQLPKLIFGLLLMGAGVTFFANKVDRNAQLLPQADVIMTSVEEVSSSAKPLVRYLQKLPKKIKKIIASLPHQEVNEEEASLFDMLWLLLASVIFVPIFQKIPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAVAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLATAVAIGWVVHFICGQPVPAAIVVGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLILIPLISPNSSKGGVGFQAIAEALGMAAVKAAVAITAIIAGGRLLLRPIYKQVAENQNAEIFSANTLLVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLLVSNFPVIGVTLGLLICGKTILVSLMGRMFGISFISAIRAGLLLAPGGEFAFVAFGDAVNQGIMSSQLSSLLFLVVGISMAITPWLAAGGQLIASRFEQSDVRSLLPVESETDDLQDHIIICGFGRVGQIIAQLLSERLIPFVALDVRSDRVAVGRGLGLPVYFGDAGSREVLHKLGAERACAAAITLDTPGANYRTVWALSKYFPNVKTFVRAHDVDHGLNLEKAGATAVVPETLEPSLQLAAALLSQSKLPTSEIAATINEFRSRHLAELTELCEASGSSLGYGFNKIMGKPKSQSTDSLDETPVSEGTLAV 1199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g02526 1199 FunFam K(+) efflux antiporter 2 chloroplastic 591 977 - -
Phco3g02526 1199 Pfam Sodium/hydrogen exchanger family 601 971 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Phco3g02526 1199 Coils Coil 278 340 - -
Phco3g02526 1199 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1000 1141 IPR036291 -
Phco3g02526 1199 FunFam K(+) efflux antiporter 2 chloroplastic 999 1163 - -
Phco3g02526 1199 MobiDBLite consensus disorder prediction 442 462 - -
Phco3g02526 1199 Coils Coil 158 192 - -
Phco3g02526 1199 Gene3D - 999 1163 - -
Phco3g02526 1199 Pfam TrkA-N domain 1004 1117 IPR003148 GO:0006813
Phco3g02526 1199 MobiDBLite consensus disorder prediction 1179 1199 - -
Phco3g02526 1199 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 200 1187 - -
Phco3g02526 1199 ProSiteProfiles RCK N-terminal domain profile. 1003 1125 IPR003148 GO:0006813
Phco3g02526 1199 NCBIfam monovalent cation:proton antiporter-2 (CPA2) family protein 602 882 IPR004771 GO:0006812|GO:0008324|GO:0016020
Phco3g02526 1199 Gene3D - 591 978 IPR038770 -
Phco3g02526 1199 MobiDBLite consensus disorder prediction 256 278 - -
Phco3g02526 1199 MobiDBLite consensus disorder prediction 442 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g02526 Phco-Chr3 51941457 51953044 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g02526 3 51941457 51953044 Phco3g02526 3 51941457 51953044 ECH
Phco3g02526 3 51941457 51953044 Phco1g00813 1 7546651 7562398 PCT