Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00813 ATGGATGTAGCTTTTAGGTTACCGCAGTCAAATGTGGTATTAGATGGTTTGGATTCTTGCTCTGTATTTGGAGGGAGAGGTTTCGTATGCGCTTTTCTCGGCAACTTGAGGTCTACTTCGAAGGCTCGTTTTAGTCGGATGAACAAGATAGGTAGTTGGAGTGGTTCTAGAGTAGACTGTTTCGGAGAGTTGAAAGTTTCTAGTGGGAAGAGGAGTTTGTGTTGGAAGAGAAATAAATTTTTTAGGGAGAATAGGAACATTTGGACAAAGTGCCAGGGTAACGATTCTTTATCATATCTCAATGGCAATGGACGGAATGTTGATAGGGTGGAAAGTGCGGATGAGAACTACGGTTCCAGTGCCGAATCGAGTGAACCTTTGGGAGAAGAAGGGCAAGAAGAGAGGAAAGAAGCTGGGGGTGAAGTAGTGGAGGAGCAAAATGTGGATGAATTGAAAGAACTGCTGCAAAAGGCCAATAAAGAATTAGAAGCTGCTCGAGAAAACAGCATTGCATTTGAGGAAAAGGTTAAGAAGATATCTGAGACTGCGATTTTTTTGCAAGATGAAGCAGCAAGTTCTTGGAACAACGTTACTTCTACTCTTGACATCATCCAAGATATTGTGAGTCAAGAATTTATTGCCAAAGAAGCTGTTCAGAAAGCAACTATGGCTCTTTCTCTGGCTGAGGCAAGGCTTCAAGTAGCCATAGAGTCGGTCGAGGTTACAAAAGAAGCTTATGATTCCTCACAAAGTTCTAACAATAGTAATGATGATAAAGATATAATGCAAGAAGAGAAGGAACTTTTGGATGCTAAGGAAGATATCAAGGAAGCCCAGACAAATTTAGCAAATTGTGAGAGTGAGCTGAGAGGCTTGCAATGTAGAAAGGAGGAGTTCCAGAATGAAGTGAACAAATTGCATGAAGTTGCAGAACAGGCGCAGCTGAAAGCAGCAAATGCAGAGGAAGATGTTGCAAACATAATGCATTTAGCGGAGAAAGCTGTTGCTTCCGAAATTGAGGCTACACAACACGTGAATGATGCGGAGATGGCATTGCAGAAAGCAGAAAAATCTGCCTCTAGTTTTAATGCTGATATCAAAGACACTCTACAAGTACAAGAGGTTGTAGGTATTCCCGAGGACGAGGAAGTGGTTCAAGGTTTTTCAGGTGATGACGTGGTTGAAAGAGAGGCTGATATCTCAAATGATGATGAGCTTTCACCCGAAACACAATCTGATAACAATAGACAAAGTTTGGAAGGCATGGCACAGTCTGATTATCTGAGTGATCATGAGAATGGACAATTAAGCTTAGACCCTTCTAAAGAAGCTGAAGTTGAAACAGAGAAGTCAAAGATTGTAGTTCAAACAAAAAAACAGGAAACACAAAAAGATTTGACTAGAGATAATTCATCATTTGCTCCCAAGACATTATTGAAGAAATCTTCCCGATTTTTTCCTTCATCATTCTTCTCTTTTACTGCTGACGAGGCTGATAACACACCTGCATCGGTTTTGCTTGGTCTTATGGAGTCTGCACAGAAGCAACTACCCAAGCTAATTGTTGGGTTATTGTTCATTGGAGCTGGGCTTGTACTCTATACTAATAGAACAGAAAGGCGTGCTCAGCTGCTTCAGCAGCCAGAAGTCATTGTAACCACTGTTGAAGAAGTTTCTTCAACTACAAAGCCTCTGGTTAGACAGCTTCAGGATCTTCCCAGGAGAATTAAGAAAATTATTGCATCGTTACCTGATCAAGAGGTGAATGAGGAGGAAGCCTCCCTCTTTGACATGCTCTGGTTACTCCTTGCAAGTGTTGTATTTGTACCGATATTTCAAAAGATTCCTGGAGGCAGTCCTGTTCTTGGCTACTTGGCTGCTGGTATCTTGATTGGGCCATATGGTCTCTCCATCATTCGTCATGTACATGGGACAAAAGCAATAGCCGAGTTTGGAGTTGTTTTCCTGTTATTCAATATTGGCCTGGAGCTTTCTGTTGAAAGACTTAGTTCAATGAAGAAGTATGTCTTTGGATTAGGCTCTGCTCAGGTTTTGGTGACTGCTGTAGTTGTTGGCTTGGTAGCTCATTATATTTGTGGTCAAGCTGGCCCTGCTGCTATCGTCATTGGGAATGGTCTAGCATTATCATCAACTGCTGTTGTTTTGCAAGTGTTACAGGAGAGAGGTGAGAGCACATCACGGCATGGAAGGGCTACGTTCTCTGTTTTGCTTTTTCAGGATTTGGCTGTTGTTGTCTTGCTAATACTCATACCTCTAATTTCACCTAATTCTTCCAAAGGAGGGGTTGGTTTTCAAGCCATTGCTGAAGCACTTGGTCTGGCCGCTGTTAAGGCAGTGGTTGCCATTGCAGCCATAATTGCAGGTGGACGATTGCTCCTGCGACCCATATATAAGCAGATTGCAGAGAATCAAAATGCAGAAATATTTTCTGCCAATACACTCTTCGTTATTCTTGGGACTAGCCTTCTCACAGCCAGGGCTGGACTTTCAATGGCATTGGGGGCATTTTTGGCGGGTTTACTATTGGCAGAAACAGAGTTTTCCTTACAGGTTGAATCTGATATTGCCCCGTACCGTGGCCTTCTTCTGGGTCTCTTCTTTATGACGGTTGGAATGTCAATTGATCCAAAACTTCTTGTTTCAAACTTTCCAGCCATTGCTGGGACCTTGGGACTTTTGATATTTGGCAAGACTTTGTTGGTTTCTTTAATTGGTAGAACATTTGGTATTTCTCTCATTTCTTCTATTAGAGTTGGTCTTCTTCTTGCTCCTGGTGGAGAATTTGCATTTGTAGCTTTTGGTGAAGCTGTTAATCAGGGCATAATGTCTTCCCAGTTGTCCTCCTTACTGTTTCTTGTTGTGGGAATTTCAATGGCCATCACTCCTTGGCTAGCTGAAGGAGGGCAGTTCCTTGCTTCCCGTTTTGAGCTGCATGATGTTCGAAGTTTATTACCTGTAGAAAGTGAGACAGACGATTTGCAAAATCATATCATTATTTGTGGATTTGGGCGAGTTGGGCAAATCATCGCACAACTTCTTTCTGAGCAACTTATTCCTTTTGTTGCACTAGACGTGAGAAGTGATAGAGTGGCAATTGGACGTTCCTTGGATCTCCCTGTGTACTTTGGAGATGCCGGTAGTCGAGAGGTCCTGCATAAGGTTGGAGCTGAAAGGGCAAGTGCCGCCGCAGTAACTCTAGATTCACCTGGAGCGAATTACAGAACCGTGTGGGCTCTGAGCAAACACTTCCCAAACGTGAAAACTTTTGTTCGCGCTCATGATGTTGATCATGGACTGAATTTGGAAAAGGCTGGAGCTACTGCTGTTGTCCCAGAGACCTTGGAACCAAGTCTTCAACTAGCAGCTGCCGTGCTTTCTCAGGCTAAACTTCCTACATCAGAGATTGCAGCAACCATAAACGAATTCAGATCCCGCCATCTGTCTGAGCTCACTGAACTATCTGAAACAAATGGAAGTTCTTTTGGATATGTTGGAAGCAAACCCAATTCATCAGATGATACTCAGGCCTCTGAAGGGAAAGTGGCGACATGA 3573 0.4296 MDVAFRLPQSNVVLDGLDSCSVFGGRGFVCAFLGNLRSTSKARFSRMNKIGSWSGSRVDCFGELKVSSGKRSLCWKRNKFFRENRNIWTKCQGNDSLSYLNGNGRNVDRVESADENYGSSAESSEPLGEEGQEERKEAGGEVVEEQNVDELKELLQKANKELEAARENSIAFEEKVKKISETAIFLQDEAASSWNNVTSTLDIIQDIVSQEFIAKEAVQKATMALSLAEARLQVAIESVEVTKEAYDSSQSSNNSNDDKDIMQEEKELLDAKEDIKEAQTNLANCESELRGLQCRKEEFQNEVNKLHEVAEQAQLKAANAEEDVANIMHLAEKAVASEIEATQHVNDAEMALQKAEKSASSFNADIKDTLQVQEVVGIPEDEEVVQGFSGDDVVEREADISNDDELSPETQSDNNRQSLEGMAQSDYLSDHENGQLSLDPSKEAEVETEKSKIVVQTKKQETQKDLTRDNSSFAPKTLLKKSSRFFPSSFFSFTADEADNTPASVLLGLMESAQKQLPKLIVGLLFIGAGLVLYTNRTERRAQLLQQPEVIVTTVEEVSSTTKPLVRQLQDLPRRIKKIIASLPDQEVNEEEASLFDMLWLLLASVVFVPIFQKIPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLVTAVVVGLVAHYICGQAGPAAIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLILIPLISPNSSKGGVGFQAIAEALGLAAVKAVVAIAAIIAGGRLLLRPIYKQIAENQNAEIFSANTLFVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLLVSNFPAIAGTLGLLIFGKTLLVSLIGRTFGISLISSIRVGLLLAPGGEFAFVAFGEAVNQGIMSSQLSSLLFLVVGISMAITPWLAEGGQFLASRFELHDVRSLLPVESETDDLQNHIIICGFGRVGQIIAQLLSEQLIPFVALDVRSDRVAIGRSLDLPVYFGDAGSREVLHKVGAERASAAAVTLDSPGANYRTVWALSKHFPNVKTFVRAHDVDHGLNLEKAGATAVVPETLEPSLQLAAAVLSQAKLPTSEIAATINEFRSRHLSELTELSETNGSSFGYVGSKPNSSDDTQASEGKVAT 1190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00813 1190 Gene3D - 591 976 IPR038770 -
Phco1g00813 1190 MobiDBLite consensus disorder prediction 128 143 - -
Phco1g00813 1190 MobiDBLite consensus disorder prediction 1164 1190 - -
Phco1g00813 1190 ProSiteProfiles RCK N-terminal domain profile. 1003 1125 IPR003148 GO:0006813
Phco1g00813 1190 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1000 1141 IPR036291 -
Phco1g00813 1190 MobiDBLite consensus disorder prediction 430 467 - -
Phco1g00813 1190 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 183 1175 - -
Phco1g00813 1190 FunFam K(+) efflux antiporter 2 chloroplastic 999 1163 - -
Phco1g00813 1190 Pfam TrkA-N domain 1004 1117 IPR003148 GO:0006813
Phco1g00813 1190 Coils Coil 345 365 - -
Phco1g00813 1190 Coils Coil 141 182 - -
Phco1g00813 1190 Pfam Sodium/hydrogen exchanger family 600 971 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Phco1g00813 1190 Gene3D - 999 1163 - -
Phco1g00813 1190 Coils Coil 261 330 - -
Phco1g00813 1190 MobiDBLite consensus disorder prediction 112 143 - -
Phco1g00813 1190 NCBIfam monovalent cation:proton antiporter-2 (CPA2) family protein 602 882 IPR004771 GO:0006812|GO:0008324|GO:0016020
Phco1g00813 1190 FunFam K(+) efflux antiporter 2 chloroplastic 591 977 - -
Phco1g00813 1190 MobiDBLite consensus disorder prediction 436 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00813 Phco-Chr1 7546651 7562398 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00813 1 7546651 7562398 Phco1g00813 1 7546651 7562398 ECH
Phco3g02526 3 51941457 51953044 Phco1g00813 1 7546651 7562398 PCT