Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g02493 ATGAAGCAGAAACCGTTTCTGGATGTTTCTGATTCTGGGGAAACTGCTTCTGAGAAAAGACTAGTGGGGCATGTTTTGGTACTTCAGTTTTGTTGGTCGAGTCATGCTTTCAGTAAACAAGCTTTGTGTGATCATATGAGATTCTCGAAGTTGTTGGGGGCTTCGTTTTCTTGTGTTCCATTTGTGGCAGCTAATCATCAGTTCTGCGGCTACCAAACCAGAACCATGGTGGAAGATGGTGATGCAGTTGATGCACGGTCCACAGAAGACTGGTTGTTGCATGCACAGGAACTTGTTCCCGTTGTCCTTGATAAGGCAAGAGAGGTTAAGGGATTTGCTGGTAGATGGAAGATGATCATTGCAAAATTGGAACAGATCCCCTCGCGATTATCAGATTTGTCAAGCCATCCGTGCTTCTCAAAAAATGCTCTGTGCAAGGAGCAGTTGCAAGCTGTGTCAAAGACACTAGGGGAAGCGATTGAATTAGCTGAGTTGTGTATGACGGAGAAGTATGAGGGTAAGCTTCGGATGCAGAGTGATCTAGATGCATTGACTGGGAAGCTTGATTTGAATTTGAGGGATTGTGGGCTTTTGATCAAAACTGGTGTGCTGGGTGAGGCTACTTTACCATTGGCTGTGTCTAGTTCTGCGGCAGAATCAGATGTTGCAACACACAACATAAGGGAATTGCTGGCGCGCCTTCAGATTGGGCACTTGGAAGCGAAGCACCAAGCTCTAGACAGCGTTGTTGAGGCCATGAAGGAAGATGAGAAGAATGTTTTAGCTGCTCTTGGTCGGAGCAACATTGCTGCTTTGGTTCAATTGCTTACAGCTACCTCTCCCAGAATAAGAGAGAAAACAGTTACTGTTATATGCTCGCTTGCGGAATCTGGTAGTTGCGAAAATTGGCTAGTTTCCGAGGGAGTTCTGCCACCTCTTATAAGGCTTGTTGAATCTGGCAGTGCAGTGGGGAAGGAGAAGGCCACAATATCCCTTCAGAGGTTGTCTATGTCAGCCGAAACAGTTCGTGAAATCGTGGGGCATGGTGGGGTTCCTCCATTGGTTGAACTTTGTCAAATTGGTGACTCTGTGTCACAGGCTGCGGCTGCTTGTACTCTGAAGAACATATCAGCTGTGCCTGAGGTGAGACAAACTTTGTCTGAAGAAGGGATTGTGAGGATCATGATCAATCTGCTTAACTGTGGAATTCTATTAGGTTCCAAAGAGCATGCTGCAGAATGTTTGCAGAACCTCACTGCAAGCAATGAGAATCTAAGGAGGAGTGTCATATCAGAAGGTGGTGTCAGGAGTCTTCTGGCTTATCTTGATGGTCCACTTCCTCAAGAGTCCGCTGTTGGAGCATTGAGAAATTTGGTCGGATCGGTCCCTGAGGAATCCTTGGTCTCTCTTGGTTTGGTCCCCCGATTGGTTCATGTGTTGAAGTCCGGATCCTTAGGTGCTCAGCAAGCCGCCGTAGCCGCAATATGCCGAGTTTGCAGCTCCACAGACATGAAGAAAACGGTTGGTGAAGCTGGTTGCATCCCTCTCCTTGTGAAAATGCTCGAGGCCAAGTCAAACAGTGCCAGAGAGGTAGCTGCTCAAGCAATTGCAAGCCTGATGGTTGTGTCTCAGAATAGGAGAGAAGTTAAGAAGGATGATAAAAGTGTGCCAAACTTGGTTCAGTTGCTTGATCCAAGTCCTCAGAACACTGCAAAAAAATATGCAGTCACTTGCCTTGGATCACTTTCTTCAAGTAAGAAATGTAAGAAGCTAATGATCTCGTATGGGGCAATTGGGTATCTGAAGAAACTTACTGAGATGGACATTCCAGGAGCTAAAAAGCTACATGAACGGTTGGAAAGAGGAAAATTAAGAAGTTTGTTCAGCAAGAAATAG 1896 0.4599 MKQKPFLDVSDSGETASEKRLVGHVLVLQFCWSSHAFSKQALCDHMRFSKLLGASFSCVPFVAANHQFCGYQTRTMVEDGDAVDARSTEDWLLHAQELVPVVLDKAREVKGFAGRWKMIIAKLEQIPSRLSDLSSHPCFSKNALCKEQLQAVSKTLGEAIELAELCMTEKYEGKLRMQSDLDALTGKLDLNLRDCGLLIKTGVLGEATLPLAVSSSAAESDVATHNIRELLARLQIGHLEAKHQALDSVVEAMKEDEKNVLAALGRSNIAALVQLLTATSPRIREKTVTVICSLAESGSCENWLVSEGVLPPLIRLVESGSAVGKEKATISLQRLSMSAETVREIVGHGGVPPLVELCQIGDSVSQAAAACTLKNISAVPEVRQTLSEEGIVRIMINLLNCGILLGSKEHAAECLQNLTASNENLRRSVISEGGVRSLLAYLDGPLPQESAVGALRNLVGSVPEESLVSLGLVPRLVHVLKSGSLGAQQAAVAAICRVCSSTDMKKTVGEAGCIPLLVKMLEAKSNSAREVAAQAIASLMVVSQNRREVKKDDKSVPNLVQLLDPSPQNTAKKYAVTCLGSLSSSKKCKKLMISYGAIGYLKKLTEMDIPGAKKLHERLERGKLRSLFSKK 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g02493 631 Gene3D - 505 618 IPR011989 -
Phco3g02493 631 Gene3D - 216 405 IPR011989 -
Phco3g02493 631 Gene3D - 406 504 IPR011989 -
Phco3g02493 631 SUPERFAMILY ARM repeat 227 608 IPR016024 -
Phco3g02493 631 Pfam Armadillo/beta-catenin-like repeat 502 539 IPR000225 GO:0005515
Phco3g02493 631 Pfam Armadillo/beta-catenin-like repeat 342 378 IPR000225 GO:0005515
Phco3g02493 631 SMART arm_5 379 420 IPR000225 GO:0005515
Phco3g02493 631 SMART arm_5 338 378 IPR000225 GO:0005515
Phco3g02493 631 SMART arm_5 542 584 IPR000225 GO:0005515
Phco3g02493 631 SMART arm_5 461 500 IPR000225 GO:0005515
Phco3g02493 631 SMART arm_5 501 541 IPR000225 GO:0005515
Phco3g02493 631 SMART arm_5 256 296 IPR000225 GO:0005515
Phco3g02493 631 SMART arm_5 421 460 IPR000225 GO:0005515
Phco3g02493 631 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 84 629 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g02493 Phco-Chr3 51669413 51672612 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g02493 3 51669413 51672612 Phco3g02493 3 51669413 51672612 ECH
Phco3g02493 3 51669413 51672612 Phco1g00854 1 8122399 8124081 PCT