Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g02462 ATGGCACCCAACAACAACAGAACCAAGGGATCGCATTTTCCCCTGCTTGCCTTCCTCCTTCTGTGCCTCCTTGCGCCCCTTCTCTTCTTCAGCGCATCGCCCCTTCATACTTTTCATGATCAAGGTGGTAATTCGGCTGTTACCAGCAGAAAGGTTGCCAGATTCAGAGAGTGGCAGTCATTGCAGGATCTTAAATCGCTTTTTTCGAAAGAGGTTCTTGATGTTATTGTTTCCAACACAAATGATGATGGCCCTTTGAGTCTTGAGAGTTTTAGAAAAAATAACTTATCTGCTTCATGGAGAGTTGTTGGATCAAAGGCTTCTAATGCTACAAATCAGGTTAACGAACCAGCAAACAATGTTGGACAAGAGAAGCAAAAAGGGAAGGAAGGAAGATTTTCAGTTGGTCATGCTCAGTGGACTGACAGTCCTGCACAGCAATCCAGAAGGCAATTAATAGAGAAAAGGAAGGAAAAACGTGCTGCTGAGTTGGTAAAAGACGATGAAGTAGTTGTAAAACTTGAAGATTCAGCTATTGAACACTCAAAATCTGTTGATTCAGCAGTTCTTGGTAAATACAACATTTGGAGGAAAGAAAATGAGAATGAAAATCCCGATTCTACTGTACGGCTGATGCGAGACCAAATCATTATGGCTAAGGTTTACTTGAGTATTGCAAAGATGAAGGACAATCTTGAACTGTACCAAGAACTGGAATCTCAGCTTAAAGAAAGTCAGCGTGCTTTAGGTGAGGCAACTTCTGATGCTGACCTACATCCAAGTGATCATGAAAAAATCAAAACTATGGGCCAAGTTCTTTCCAAGGCAAAAGAGCAATTGTATGACTGCAACTTGGTTACTGGGAAATTGAGGGCAATGCTACAAACAGCTGATGAGCGGGTTAGGAGCTTGAGAAAACAAAGCACATTCCTTAGTCAGTTAGCTGCCAAGACCATACCAAATGGAATTCACTGCTTATCTATGCGCCTTACCATAGACTACTTCCTCCTTCCCCTTGAACAGAGAAAATTTCCTAGAAGTGAGAATTTGGAGAATCCTAGTCTCTATCATTATGCTCTATTCTCGGACAATGTCTTGGCTGCATCTGTTGTTGTGAACTCAACTATTGTGAATGCAAAGGATCCTTCAAAGCATGTGTTTCACCTTGTTACTGATAAACTAAATTTTGGAGCCATGAACATGTGGTTTTTGCTGAATCCTCCTGGAAAAGCTACAATCAATGTTGAAAATGTTGATGAATTTAAGTGGTTGAACTCATCCTATTGCCCAGTCTTGAAGCAGCTTGAATCTGCAACAATGAAAGAGTATTATTTCAAGGCAGGCCATCCAACTACTACTGGTGCTTCGAATCTCAAGTACAGAAATCCAAAATATCTGTCAATGCTCAACCACCTAAGATTCTATCTTCCACAAGTTTATCCAAAATTGGACAAGATTCTTTTTCTTGATGATGACATTGTTGTCCAGAAGGATCTGACTGGATTATGGGCTGTGAATCTTCATGGAAAAGTAAATGGTGCTGTTGAAACATGTGGGGAGAGTTTTCACCGATTTGACAAATACCTTAACTTTTCAAATCCACATATTGCAAAAAATTTTGATCCAAATGCTTGTGGTTGGGCATACGGGATGAACATGTTTGATTTGAAGGTGTGGAAAAAGAAAGACATCACTGGCATATATCACAAGTGGCAGAATTTGAACGAAGACAGGGTGCTGTGGAAGCTGGGGACATTGCCTCCAGGCCTGATGACATTCTATGGATTAACACATCCTCTAAATAAATCATGGCATGTTCTTGGTCTGGGTTACAATCCAAGTGTGGATCGTTCAGAGATCGATAATGCGGCAGTTGTACACTACAATGGTAATATGAAGCCATGGTTAGATATAGCCATGACAAAGTATCGGACTTACTGGACCAAATATGTAAAATTTGATCATCCCTATCTTCAGAATTGTAAGCTACGTCAATGA 1998 0.4054 MAPNNNRTKGSHFPLLAFLLLCLLAPLLFFSASPLHTFHDQGGNSAVTSRKVARFREWQSLQDLKSLFSKEVLDVIVSNTNDDGPLSLESFRKNNLSASWRVVGSKASNATNQVNEPANNVGQEKQKGKEGRFSVGHAQWTDSPAQQSRRQLIEKRKEKRAAELVKDDEVVVKLEDSAIEHSKSVDSAVLGKYNIWRKENENENPDSTVRLMRDQIIMAKVYLSIAKMKDNLELYQELESQLKESQRALGEATSDADLHPSDHEKIKTMGQVLSKAKEQLYDCNLVTGKLRAMLQTADERVRSLRKQSTFLSQLAAKTIPNGIHCLSMRLTIDYFLLPLEQRKFPRSENLENPSLYHYALFSDNVLAASVVVNSTIVNAKDPSKHVFHLVTDKLNFGAMNMWFLLNPPGKATINVENVDEFKWLNSSYCPVLKQLESATMKEYYFKAGHPTTTGASNLKYRNPKYLSMLNHLRFYLPQVYPKLDKILFLDDDIVVQKDLTGLWAVNLHGKVNGAVETCGESFHRFDKYLNFSNPHIAKNFDPNACGWAYGMNMFDLKVWKKKDITGIYHKWQNLNEDRVLWKLGTLPPGLMTFYGLTHPLNKSWHVLGLGYNPSVDRSEIDNAAVVHYNGNMKPWLDIAMTKYRTYWTKYVKFDHPYLQNCKLRQ 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g02462 665 CDD GT8_like_1 356 652 - -
Phco3g02462 665 Coils Coil 225 255 - -
Phco3g02462 665 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 155 663 IPR029993 GO:0047262
Phco3g02462 665 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 358 659 IPR029044 -
Phco3g02462 665 SUPERFAMILY Nucleotide-diphospho-sugar transferases 356 662 IPR029044 -
Phco3g02462 665 Pfam Glycosyl transferase family 8 325 639 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g02462 Phco-Chr3 51295316 51300077 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g02462 3 51295316 51300077 Phco1g00903 1 8926338 8934022 PCT