Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00903 ATGTGTCGGTTCACAACTTTGATTCACGCGCACAGTGCCGTCGCAACTTCTCTCTCTCGTGATGGATTTGGACTAGCATTGCGCTGTGAATCCTTGCGAGCTCACTCTTCAACCAGATCGAAGTTTGGTTTCGCTCTTCTGATCTGCAATGACGCCGAGGCGAGGGTTTTCCTTCGCCAAGAGCAGAGGCAAGGGCTCCTGCTTCCCCGTTCTCGGTTTCGTTCTCCTCTGCGTTTTGGCGCCGGTGGTTTTCTTCCTCGCACGGGGACTCTACGCTGCGGTGAATTGTTTGCCGTAGTTGTTGTAGAAGCTACAACCGGTGGGTTTAACTGCTTAACCAGAGATGCTGTGAATGGAATTGGTTGGACACGCGTTTTGGATAGGATTTCTGAAAGTGTAATGTGCGGTTGGAGTGATAAGTTGGAAGGGCGAGGTCAAAGAGAGGGATTTGTGAGAAGTTCTGTGATCCTCAGATGGGAAACTGTGCAAAAAGGGGTAATTTACTGGTTTCAGTTCGGTAAGGGTGCATGCTTAGTGTTGGCTTTAGTACTGATACTTTTATTTGATCAAGATTATATTTCAGATGTTCCACGTAAACAGGTTAGCAAATGGAGAGAATGGCAGGCATTGCAGGATCTCAAATCACTTTTTCCAGAAGAGGTTCTTAATGTTATTGTATCCAGCACAGATGATTTGGGACCTTTCAGTCTTGACAATTTCAGAAAGAATTTGTCTGCTTCATGGAGAGTTGTTGGATTAGAAAATTCAAACAGTGGACATGAGCTAAACCAACCAACACATGTTAGACAAGAAAAGCCAAAGGGAAAGGATGAAAGATCTTCAGATGGTCTTCCTCTGTGGACTGATAGTCCTGCACATGAAACCCGAAGGCATTTAATAGAGAAAAGGCGGGAAAAGCGTGCTGCTGAGTTGGTAAAAAAGGATAATGAAGTAACTGTAAAACTTGAAAATGCAGCTATTGAACGCTCAAAATCTGTTGAGTCAGCCGTTCTGGGTAAATACAGCATTTGGAGGAAAGAAATTGAGAATGAAAATGGTGATTCTACTGTTCGGTTGATGCGAGACCAGATCATTATGGCTAGGGTATATTTAAGCATAGCAAAGATGAAGAACAAGGTCGAACTGTATCAAGAACTAATTTTCCGGCTCAAAGAGAGTCAACGTGCCTTAGGTGATACACTTTCTGATTCGGATCTACATCACAGTGCACATGGGAAAATAAAGGCTATGGGTCAAATTTTGTCAAAAGCTAGAGAGCTATTGTATGACTGCAAATTGGTCACTGGAAAACTAAGAGCAATGCTACAGACAGCTGATGATCAAGTTAGGAGTTTGAAGAAACAGAGCACATTTCTCAGTCAGTTGGCTGCTAAGACCATACCAAATGGAATCCATTGCTTATCCATGCGCCTTACTATAGATTACTACCTCCTTCCTCCTGAAAAGAGAAAGTTCCCGGGGAGTGAGAATTTGGAGAATCCCAGTCTTTATCACTATGCACTGTTTTCAGACAATGTCTTGGCTGCATCTGTTGTTGTCAACTCAACTATTACAAATGCAAAGGATCCTTCAAAGCATGTTTTTCACCTTGTTACGGATAAACTAAATTTTGGTGCCATGAACATGTGGTTTCTGTCAAACCCTCCTGGAAAAGCGACAATCCATGTTGAAAATGTTGATGAGTTTAAGTGGTTGAACTCTTCCTACTGCCCAGTCTTGAAACAGCTTGAATCTTCTACAATGAAAGAGTATTATTTCAAGGCAGGCCATCCAAACACACTTTCCTTCGGTGCTTCCAATCTTAAGTATAGGAATCCAAAATATCTCTCAATGCTCAACCATCTGAGATTCTATCTTCCTCAGGTTTATCCAAAGTTGGATAAAATCCTATTTCTTGATGATGACATTGTTGTTCAGAAGGATTTGACAGGATTATGGGCTGTGGATCTTAATGGGAAAGTAAATGGTGCTGTTGAAACGTGTGGTCAGAGCTTTCACCGATTTGACAAGTACCTTAACTTTTCAAATCCGCATATTGCAAGAAATTTTGATCCGAATGCCTGTGGTTGGGCATACGGCATGAACATATTTGATCTGAAGGAGTGGAAAAAGAAGGACATCACCGGTATATATCACAAGTGGCAGAATATGAATGAAGACAGAGTGCTGTGGAAGCTGGGGACATTACCTCCAGGGCTAATGACGTTCTATGGTTTGACACATCCGCTAGATAAATCATGGCATGTACTTGGTTTGGGTTATAATCCAAGTGTGGATCGATCAGAGATTGATAATGCAGCAGTTGTACACTACAACGGTAATATGAAGCCATGGTTGGAAATTGCCATGACAAAGTATCGGTCTTACTGGATCAAATATGTGAAGTACGGTCATCCCTATCTTCGGACCTGTAAGCTAAATGAATAA 2448 0.4216 MCRFTTLIHAHSAVATSLSRDGFGLALRCESLRAHSSTRSKFGFALLICNDAEARVFLRQEQRQGLLLPRSRFRSPLRFGAGGFLPRTGTLRCGELFAVVVVEATTGGFNCLTRDAVNGIGWTRVLDRISESVMCGWSDKLEGRGQREGFVRSSVILRWETVQKGVIYWFQFGKGACLVLALVLILLFDQDYISDVPRKQVSKWREWQALQDLKSLFPEEVLNVIVSSTDDLGPFSLDNFRKNLSASWRVVGLENSNSGHELNQPTHVRQEKPKGKDERSSDGLPLWTDSPAHETRRHLIEKRREKRAAELVKKDNEVTVKLENAAIERSKSVESAVLGKYSIWRKEIENENGDSTVRLMRDQIIMARVYLSIAKMKNKVELYQELIFRLKESQRALGDTLSDSDLHHSAHGKIKAMGQILSKARELLYDCKLVTGKLRAMLQTADDQVRSLKKQSTFLSQLAAKTIPNGIHCLSMRLTIDYYLLPPEKRKFPGSENLENPSLYHYALFSDNVLAASVVVNSTITNAKDPSKHVFHLVTDKLNFGAMNMWFLSNPPGKATIHVENVDEFKWLNSSYCPVLKQLESSTMKEYYFKAGHPNTLSFGASNLKYRNPKYLSMLNHLRFYLPQVYPKLDKILFLDDDIVVQKDLTGLWAVDLNGKVNGAVETCGQSFHRFDKYLNFSNPHIARNFDPNACGWAYGMNIFDLKEWKKKDITGIYHKWQNMNEDRVLWKLGTLPPGLMTFYGLTHPLDKSWHVLGLGYNPSVDRSEIDNAAVVHYNGNMKPWLEIAMTKYRSYWIKYVKYGHPYLRTCKLNE 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00903 815 CDD GT8_like_1 504 802 - -
Phco1g00903 815 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 308 813 IPR029993 GO:0047262
Phco1g00903 815 MobiDBLite consensus disorder prediction 265 283 - -
Phco1g00903 815 Coils Coil 373 393 - -
Phco1g00903 815 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 506 806 IPR029044 -
Phco1g00903 815 Pfam Glycosyl transferase family 8 473 789 IPR002495 GO:0016757
Phco1g00903 815 SUPERFAMILY Nucleotide-diphospho-sugar transferases 504 812 IPR029044 -
Phco1g00903 815 MobiDBLite consensus disorder prediction 256 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00903 Phco-Chr1 8926338 8934022 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00903 1 8926338 8934022 Phco1g00903 1 8926338 8934022 ECH
Phco3g02462 3 51295316 51300077 Phco1g00903 1 8926338 8934022 PCT