Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g02419 ATGGGATCTGGCAGCAAAGGCGGAAAGACCACATGCCTGGTGGTAACATTATGTCTAGTGATTGCAATTTTGTTGGTATTGGTGCTCTTGGCATTCACAGTGTTCAAACCACATCCGCCTATCACCACAGTGGACACAGTGAAGGTTGAGGACATGAGCCTTGGCATGGACATATTTAGCATGAGTGTAAATGTGAACGTGACGTTGGATGTGGGTGTTTCAGTTACCAACAGAAATAAGTTTGGATTGGAGTACCACAATAGCTCTGCACAACTCTACTATAGAGGGCAATTGATTGGAGAAGGCCCTATCCCCAATGGAGAGATATCAGGAGAGGAAACTAAAGGAATGAACTTGACACTCACTATTATGGCTGATCGTTTGGCCTCCAACACTGAGGTCACCAAAGACATTGCATCAGGTTCAATGCCCCTCAACACCTTAGTGAGATTGTTTGGGATAGTCAAAGTCTTGGGCTTTATCAAATTCAATGTGGCTTCTACCTCATCTTGTGATTTCACCCTCAATATTTCCAATAGAACAATCATTGGCAATACGTGCATATCCAACACAAAGATTTCAGGTTGA 588 0.4337 MGSGSKGGKTTCLVVTLCLVIAILLVLVLLAFTVFKPHPPITTVDTVKVEDMSLGMDIFSMSVNVNVTLDVGVSVTNRNKFGLEYHNSSAQLYYRGQLIGEGPIPNGEISGEETKGMNLTLTIMADRLASNTEVTKDIASGSMPLNTLVRLFGIVKVLGFIKFNVASTSSCDFTLNISNRTIIGNTCISNTKISG 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g02419 195 Gene3D - 28 183 - -
Phco3g02419 195 SUPERFAMILY LEA14-like 22 130 - -
Phco3g02419 195 Pfam Late embryogenesis abundant protein 73 171 IPR004864 -
Phco3g02419 195 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 12 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g02419 Phco-Chr3 50745692 50746279 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g02419 3 50745692 50746279 Phco1g02047 1 60183841 60184437 PCT