Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g02047 ATGAGAAGGAAAAACAGAATGAAGGTAGGACCTGGGAAAGGGAGAAAAGTGTGCCTGACGGTGACAGGTGTTGTTATTGCACTTATACTGCTAATTGTGATACTAGCTTTGACTGTGTTCAAAGCCAAGCATCCTGTTACCACTGTGGACTCAACGAAGCTAGAGGACTTTCACATGAGTTTGGATATAGCAAAGCTTAGGGTAGATTTGAATGTGACTCTGAGAACGGATGTCTCGGTGATGAACCCAAACAAGGTTGGATTCAAGTACTCAGATAGCATCGCTCACCTCAATTACAGAGGACAGTTGATAGGTGAAGTCCCTATCCCTGCTGGAGAGATTTCGTCTGGTGAGACCAAAGGATTCAACCTCACCCTCACCATTATGGCTGACCGTTTGCTCTCCAATTCCCAACTTTTCTCTGATGTCACATCTGGGACATTGCCCCTAAATACTTTTGTGAGGATTTCTGGCAAAGTCAGCATCTTAGGCTTTATCAAAGTGCATGTGGTTTCCTCCACGTCTTGTGATGTTGTAATTAATCTTTCTAATAGAACAGTTGGGAACCAAGAGTGCCAATACAAGACAAAACTTTGA 597 0.4338 MRRKNRMKVGPGKGRKVCLTVTGVVIALILLIVILALTVFKAKHPVTTVDSTKLEDFHMSLDIAKLRVDLNVTLRTDVSVMNPNKVGFKYSDSIAHLNYRGQLIGEVPIPAGEISSGETKGFNLTLTIMADRLLSNSQLFSDVTSGTLPLNTFVRISGKVSILGFIKVHVVSSTSCDVVINLSNRTVGNQECQYKTKL 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g02047 198 Gene3D - 33 180 - -
Phco1g02047 198 SUPERFAMILY LEA14-like 42 170 - -
Phco1g02047 198 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 8 193 - -
Phco1g02047 198 Pfam Late embryogenesis abundant protein 78 175 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g02047 Phco-Chr1 60183841 60184437 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g02419 3 50745692 50746279 Phco1g02047 1 60183841 60184437 PCT