Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g02335 ATGTTACGATGCATCACAGAAGCACATGGGTCATTCAAATCAGGCCACCCACCAAAATCAACCCACTTCAATTCTCTTAAAGCACCATCATCATTTTCTCTCCCACTCAAGTATATAAACACCACACCCCATCACTTCTCTTCACCACCCACATTACAAAGCAACACCAAGCCGATATCGTATACCACTTCTCTCCTATTTTATAGAAACATTCTTTCTGCGACTATGGCCAGCGTGAAGGTTGCATGCGTGGTTGTAATGTTCATGGCTGTGGTGAGTGCACCTATGATGGTGCAGGCCATTTCATGCAACGAAGTAACAGTGCAAATGACACCGTGCCTATCTTACTTGATGAATGGTGGAGCGGCTTCAGCAGGGTGCTGTAGCGGAGTGAGGAACATTCTGGGTGCTGCGGGCACCACCGTTGACAAACAAACTGTGTGCAACTGTCTCAAAAATGCTGCTGGTAGGTTTAACATCAATGAGAAGTATGCTCAGGCACTCCCTGGCCTCTGCAATGTCAATGTCCCTTACAAGATCAGCCGCTCCACCAACTGTGCAAACATCAGGTTCTGA 576 0.4705 MLRCITEAHGSFKSGHPPKSTHFNSLKAPSSFSLPLKYINTTPHHFSSPPTLQSNTKPISYTTSLLFYRNILSATMASVKVACVVVMFMAVVSAPMMVQAISCNEVTVQMTPCLSYLMNGGAASAGCCSGVRNILGAAGTTVDKQTVCNCLKNAAGRFNINEKYAQALPGLCNVNVPYKISRSTNCANIRF 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g02335 191 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 2-RELATED 80 187 IPR000528 GO:0006869|GO:0008289
Phco3g02335 191 CDD nsLTP1 101 186 - -
Phco3g02335 191 ProSitePatterns Plant lipid transfer proteins signature. 168 189 IPR000528 GO:0006869|GO:0008289
Phco3g02335 191 Gene3D - 100 191 IPR036312 -
Phco3g02335 191 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 101 188 IPR036312 -
Phco3g02335 191 PRINTS Plant phospholipid transfer protein signature 102 118 IPR000528 GO:0006869|GO:0008289
Phco3g02335 191 PRINTS Plant phospholipid transfer protein signature 122 136 IPR000528 GO:0006869|GO:0008289
Phco3g02335 191 PRINTS Plant phospholipid transfer protein signature 177 188 IPR000528 GO:0006869|GO:0008289
Phco3g02335 191 PRINTS Plant phospholipid transfer protein signature 143 158 IPR000528 GO:0006869|GO:0008289
Phco3g02335 191 PRINTS Plant phospholipid transfer protein signature 159 176 IPR000528 GO:0006869|GO:0008289
Phco3g02335 191 Pfam Protease inhibitor/seed storage/LTP family 103 186 IPR016140 -
Phco3g02335 191 SMART aai_6 103 186 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g02335 Phco-Chr3 49891268 49892165 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g02335 3 49891268 49892165 Phco1g01135 1 13914000 13920937 PCT