Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g01135 ATGCTTAATAGCTCTAATGAGGACAACGACGTTTCTGAGGAGGAGAGGCAGGGTATCCAGAGGCAAAAAAAAGCTCATTTTCTCTCCATGCTTGAAGTATATGGAGAAGAAGAGTGCAACACACATGACGACATAAGTGGACGGATTACCATGAGGTCAAGGGCAAGGGAGAGAGCGGCTGCAGCAACATCTTGTAAAGGAGGTGTGGCGAAGGAGGAAGATGACGACGATGAAAAAAATGTCGCGGTGAAGAAGAATCATTTCCAATTCCCTTTGAGAATGGCCAGTGTGAAGTTTGCATGCGTGGTTGTGTTGTGCATGGCGGTGGTGGGTGCACACACTGCCCAGGGGATGACCTGTGGGCAAGTTCAGAGTAACCTAGTGCCGTGCGTAACATTCCTTCAGAACGGTGGGTTTGTTCCCGCAGGATGCTGTAACGGGGTAAGGAATATCTTGAACAGTGCCAGGAGCACTGCTGATCGCCGTGGCATCTGTAACTGCTTGAAGACTGCTGCTGGGGCTGTTCGTGGGCTCAATCCCAATAATGCTCAGGCTCTCCCTGGAAAGTGTGGGGTAAGCATACCCTACAAGATCAGCACCTCCACCAACTGTGCCAGGTATATCTCTTTGTTCATGTGGAGATCACTCAAGATCCTCACCTTAAAACCTAGATACTCACCTTAA 684 0.4942 MLNSSNEDNDVSEEERQGIQRQKKAHFLSMLEVYGEEECNTHDDISGRITMRSRARERAAAATSCKGGVAKEEDDDDEKNVAVKKNHFQFPLRMASVKFACVVVLCMAVVGAHTAQGMTCGQVQSNLVPCVTFLQNGGFVPAGCCNGVRNILNSARSTADRRGICNCLKTAAGAVRGLNPNNAQALPGKCGVSIPYKISTSTNCARYISLFMWRSLKILTLKPRYSP 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g01135 227 MobiDBLite consensus disorder prediction 1 21 - -
Phco1g01135 227 Pfam Protease inhibitor/seed storage/LTP family 120 204 IPR016140 -
Phco1g01135 227 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 119 206 IPR036312 -
Phco1g01135 227 CDD nsLTP1 119 204 - -
Phco1g01135 227 PRINTS Plant phospholipid transfer protein signature 177 194 IPR000528 GO:0006869|GO:0008289
Phco1g01135 227 PRINTS Plant phospholipid transfer protein signature 195 206 IPR000528 GO:0006869|GO:0008289
Phco1g01135 227 PRINTS Plant phospholipid transfer protein signature 139 153 IPR000528 GO:0006869|GO:0008289
Phco1g01135 227 PRINTS Plant phospholipid transfer protein signature 160 175 IPR000528 GO:0006869|GO:0008289
Phco1g01135 227 PRINTS Plant phospholipid transfer protein signature 119 135 IPR000528 GO:0006869|GO:0008289
Phco1g01135 227 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 2-RELATED 98 205 IPR000528 GO:0006869|GO:0008289
Phco1g01135 227 FunFam Non-specific lipid-transfer protein 117 208 - -
Phco1g01135 227 Gene3D - 117 207 IPR036312 -
Phco1g01135 227 SMART aai_6 120 204 IPR016140 -
Phco1g01135 227 Coils Coil 2 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g01135 Phco-Chr1 13914000 13920937 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g02335 3 49891268 49892165 Phco1g01135 1 13914000 13920937 PCT