Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g02332 ATGGCTTCTAGGGACAAAAGAAGAGCGTCTCTGGAACAGACTTTGCAACAACTTCGCGATGTCACAAACTCCACTGCTCTGAACAAAGCCTCAATAATTGTAGATGCCTCAAAATACATAGAGGAGTTGAAACAAAAGGTGGAGGGACTGAACTCGGAGCTGGGGATCACGGAATCATCATCAAACTCTCAAATTGATGAACTACCTACGGTAACTGTGAAAACCCTAAAAAAGGGTTTCCTCATTAATGTGCTTTTAGAGAAGAATAGCCCTGGTATGCTCGTGTCTATACTCGAAGCCTTCGAAGAACTTGGTCTTGATGTGCTTGATGCTAGGGTTTCTTGTGAAGACAGCTTCCAGCTAGAAGCTGTGGGAAGAGAAAGTCACAAGAACGACAGTGTTGACGCGCAAGTGGTAAAGCAAGCAGTGTTGCGAGCAATCAAGAACGAGGACTAA 456 0.4452 MASRDKRRASLEQTLQQLRDVTNSTALNKASIIVDASKYIEELKQKVEGLNSELGITESSSNSQIDELPTVTVKTLKKGFLINVLLEKNSPGMLVSILEAFEELGLDVLDARVSCEDSFQLEAVGRESHKNDSVDAQVVKQAVLRAIKNED 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g02332 151 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 148 - -
Phco3g02332 151 Coils Coil 33 60 - -
Phco3g02332 151 CDD ACT_UUR-ACR-like 88 147 - -
Phco3g02332 151 Gene3D - 3 59 IPR036638 GO:0046983
Phco3g02332 151 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 6 58 IPR036638 GO:0046983
Phco3g02332 151 ProSiteProfiles ACT domain profile. 82 151 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g02332 Phco-Chr3 49862247 49863652 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g02332 3 49862247 49863652 Phco3g02332 3 49862247 49863652 ECH
Phco3g02332 3 49862247 49863652 Phco2g02828 2 57597030 57600278 ECH
Phco3g02332 3 49862247 49863652 Phco3g00803 3 6632863 6634236 ECH
Phco11g01647 11 12656625 12657931 Phco3g02332 3 49862247 49863652 ECH
Phco3g02332 3 49862247 49863652 Phco11g01647 11 12656625 12657931 ECH