Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02828 ATGACGCTATTGCTAGGCCCAACCTGGACTTCAGATGAATTAGAGATTTTAGCCCACGATCTATTTGGGAAAAGGGAGCACAAAATGGTTTCTAAAGAGCAAAAGAGAGCAGCACTGCATGAGAAGCTGCAACTACTTCGTTCTGTTACTAACTCTCATGCCCTAAACAAAACCTCGATCATAATAGATGCGTCAAAGTATATCCAAGAGTTAAAGCAAAAGGTGGAAGAATTGAATCAAGACGTAGCCAATGCACAGACTTCAACTGACCAAAATTCTTTGCCCATGGTTACAGTAGAAACCACGGAAAAGGGTTTTCTTATTAATGTTTTTTCAGCAAAGAGTTGCCCTGGTCTGTTTGTTTCCATATTGGAGTCATTTGAAGAGATGAGTCTTAACGTGCTTGAAGCTAGGGCTACTTGTATGGACACGTTTCGATTTCACGCTGTTGGAGAAAAAAATGAAGAACAAGGTAAGAATATTGATGCAGGAGCAGTGAAACAGGCAATCGGACAAGCAATAAAGAATTGGAGCCAAAATGCTGACTAA 549 0.4044 MTLLLGPTWTSDELEILAHDLFGKREHKMVSKEQKRAALHEKLQLLRSVTNSHALNKTSIIIDASKYIQELKQKVEELNQDVANAQTSTDQNSLPMVTVETTEKGFLINVFSAKSCPGLFVSILESFEEMSLNVLEARATCMDTFRFHAVGEKNEEQGKNIDAGAVKQAIGQAIKNWSQNAD 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02828 182 Gene3D - 22 100 IPR036638 GO:0046983
Phco2g02828 182 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 26 178 - -
Phco2g02828 182 Coils Coil 61 88 - -
Phco2g02828 182 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 24 88 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02828 Phco-Chr2 57597030 57600278 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02828 2 57597030 57600278 Phco3g00803 3 6632863 6634236 ECH
Phco3g02332 3 49862247 49863652 Phco2g02828 2 57597030 57600278 ECH
Phco11g01647 11 12656625 12657931 Phco2g02828 2 57597030 57600278 ECH
Phco2g02828 2 57597030 57600278 Phco2g02828 2 57597030 57600278 ECH
Phco2g02828 2 57597030 57600278 Phco3g00803 3 6632863 6634236 PCT