Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g02257 ATGAGAATTTTCCATGTTCCTTTCCTTTTCATCATATTATGTTACTGCTTTTGGATACATCACACTTTTTATTTCACCGGGGTTTCTGGTCAAATTGTTGAGGATCAACAACAATCTTTGCTAAAACTGAAGAACAGCCTCAAATTCGAGCAAGAAAGATCTCAAAAACTTGTGTTCTGGAATTCAAGCATAGATTACTGTAAGTGGACAGGTGTAACCTGTGATAAGGAGGGACATGTTATTGGCCTTGACCTGAACGGAGAATCAATCAATGGTGGATTTGACAATTCAAGTACTCTTTTCAATCTGCAAAGTCTCCGGATACTGAATTTGTCTGTCAATAATTTCAGTTCTGAGATACCATCCGGATTCAGCAAGTTGAAGAACTTAACATATCTGAATTTGTCTCATGCTGGTTTTGTTGGGCAGATTCCAATAGAGATTTCTTCCCTGACAAGGTTGGTAACTCTTGATATCTCTTCTCTTTCCTTTTTATTAGGGCAACCGCTGACACTTGAAAAAATAGATTTGAGAATGCTTGTCAAAAACCTCACCATGATTCGACAATTGTATATGGATGGTGTAATTGTATCAGCCGAGGGAAATGAATGGAGCAATGCTTTGTTGCAGCTACATAGCCTGCAGGAGCTGAGCATGTCAAACTGCAATCTCTCAGGACCCCTTGATCCTTCCCTAACAAGACTTCAAAACCTATCAATCATTCGTCTTGATCAAAACAATTTATCATCCTTGGTGCCAAAAACCTTTGCTGATTTTCCAAATTTAACAACCCTCCACCTTAGTTCTTGTGGATTGACAGGAATATTTCCAGAGAAGATCTTTCAGGTGACAACATTGTCTGACATAGACTTATCATTTAACGATGATCTTAATGGATCTTTGCCTGGATTACCTCTGAATGGTTCCCTTCAGAAATTAATTGTGAGTCACACAAGGTTCTCAGGAGCATTACCAACTTCTATAGGTAATCTTAAGCAGTTATCCATCTTAGATCTTTCTAATTGCCATTTTAACGGAACACTACCCAGTTCAATGTCAGGACTCAAGGAACTCACTTCTCTGCTTTTGTCGTTTAATAACTTCACTGGTCCAATTCCATCCTTGAATATGTTCAGGAACCTCACGCATTTAGACTTCTCACACAATTATTTCACAGGTTCCATCACTTATGCTCACTTGGAAGGCCTAAGAAAGCTGGTCCAAGTTGATTTACAGAACAATTTCCTTGATGGAAACATTCCTTCTTCTCTTTTTGCACTTCCATTGGTGCAAAGTATCTATCTTTCCAACAACCGTTTTCGTGGACAGCTTGATGAATTTTCAAATATCTCCTCCTCCATGTTAGCGACTCTTGATTTAAGAAGTAATAATTTAGAAGGCCCCATTCCTGCATCTATTTTTAATCTCACGTCTCTTATTGTCCTCCAATTGTCATTCAACAAGTTAAATGGAACAATAAAGCTAGATGTGATTCATAGACTTCCAAAACTAACTAAACTAGCTCTTTCACACAACAATTTGTCAGTAGACACAAATCTTACAGATGTAGGCCTTGTATCTTCCTTACACAACATGAGCAGTTTAGAGTTGGCTTCCTGCTACCTGACTGAGTTCCCTAGTTTCTTGAGAAACCATTCCAAAATAACCACTTTAGACCTCTCAAGCAACCATATTCGAGGATCTATACCAACATGGATCTGGCAACTTGGCTCTCTTGCTCAATTAAATCTCTCTCATAATTTGCTCAGCAGTTTAGAAGGATCTGTGCAGAACACTGGTTTCAATCTGAACCTCCTTGACCTTCATGCTAACCAACTCCAAGGGAAGCTACAAATATTTCCAGTGCATGCCACCTATTTGGACTATTCAAGCAACAATTTCAGTTTTATTTCATCAGATGTTGGTACTCGTATGTCTCTTATAATTTTCTTGTCTCTGTCCAAAAATAATTTATCCGGGAGATTTCCTCAATTCCTGTGCAATAGTTCAAGTCTGCTAGTTCTGGATGTTTCTTATAATAACTTCGATTCGATAATTCCAGAGTGCTTAACACAGAGTGAGACACTTGTGGTATTAAATCTTCAACATAACAAGTTTAAAGGCAGCATTCCAGATAAATTTCCAGAACCTTGTGCTCTAAAAACTCTGGATCTGAATAGCAATCAATTGCAAGGCCCAATTCCCAAATCTATTGCAAATTGCACATCGTTAGAGGTGTTGGATCTTGGAAACAATGAGGTAGATGATGGATTTCCATTCTTCTTAAATATAATATCCACACTCCGCGTCCTGGTTTTGAGGAGAAACAAATTTCATGGTCCCATTGCATGTCCTCGTACCAGTGATTTTTGGGATATGCTTCAAATTGTTGACGTGGCTTTCAACAATTTCAGTGGCTTACTTCCAGCAAAATGCTTCAAGACCTGGAAAGCAATGATGCTTGATGAAGATCGTGTATCAAAATTCAGTCACATAGAATCTGAGATCCTTACATTTGATGGTATATATTATCATGATTCTGTGACTCTTACAGTCAAAGGTTTGCAGTTAGAGTTTGTCAAAGTCCTAAATCTCGTCACATCTGTTGACTTCTCATCCAACAATTTTGATGGAAGAATACCTGAAGAGCTTATGAATTTTACTGGACTTTATGCTCTCAACTTGTCTCATAATGGTTTAACAGGCCAAATCCCTTCATCTATAGGGAATTTAAAACAGCTTGAGTCATTGGACCTGTCAAGCAACTATCTTGGTGGTGAAATTCCCACACAATTTGAACGTTTAAATTTCCTCTCATACCTGAACCTTTCCTTTAACCGTCTGGTGGGAAAAATCCCTGTAGGTAGGCAACTTCTAACATTTGACGCATCTTCCTATGTTGGTAATGCAGATTTATGTGGAACTCCTTTGAAAATGTGTCCTGATCAGCGCAATTCAAAATCTGAAGTATATACAGATTCTGGTGCTAAATTTGACTGGACTTTTGTATCAATTGGAGTGGGTTTTGGGGTTGGAGCAGGAATGGTCGTGGCTCCATTGTTCTTTTTGGAGAGATTGAAAAAATGGAGCAACCATATAATCGATAAAGCTCTCCTCGTTATTCTTCCAATGCTTGGTTTGACTTGGATACCCATTCATGATGACGATGACGATGATACAGAGGAAGAGACTAAGAAAAATAACTCAGACATGGAAGAGGATTGTGATTACAATGAGATGCAAAATAGCTTGGTCCATCAAAGGTTTCGAGGGAGGTACTGTGTCTTGTGTTCCAAGCTTCATATCAGTAACAAGAAGGTAATTCATGATCCAAGGTGTACATGTTTCCCATCACCTCCCATTTCAACATCAACTTATCCAGATTCATATTCTTCTCATTCACATTCATGA 3411 0.3843 MRIFHVPFLFIILCYCFWIHHTFYFTGVSGQIVEDQQQSLLKLKNSLKFEQERSQKLVFWNSSIDYCKWTGVTCDKEGHVIGLDLNGESINGGFDNSSTLFNLQSLRILNLSVNNFSSEIPSGFSKLKNLTYLNLSHAGFVGQIPIEISSLTRLVTLDISSLSFLLGQPLTLEKIDLRMLVKNLTMIRQLYMDGVIVSAEGNEWSNALLQLHSLQELSMSNCNLSGPLDPSLTRLQNLSIIRLDQNNLSSLVPKTFADFPNLTTLHLSSCGLTGIFPEKIFQVTTLSDIDLSFNDDLNGSLPGLPLNGSLQKLIVSHTRFSGALPTSIGNLKQLSILDLSNCHFNGTLPSSMSGLKELTSLLLSFNNFTGPIPSLNMFRNLTHLDFSHNYFTGSITYAHLEGLRKLVQVDLQNNFLDGNIPSSLFALPLVQSIYLSNNRFRGQLDEFSNISSSMLATLDLRSNNLEGPIPASIFNLTSLIVLQLSFNKLNGTIKLDVIHRLPKLTKLALSHNNLSVDTNLTDVGLVSSLHNMSSLELASCYLTEFPSFLRNHSKITTLDLSSNHIRGSIPTWIWQLGSLAQLNLSHNLLSSLEGSVQNTGFNLNLLDLHANQLQGKLQIFPVHATYLDYSSNNFSFISSDVGTRMSLIIFLSLSKNNLSGRFPQFLCNSSSLLVLDVSYNNFDSIIPECLTQSETLVVLNLQHNKFKGSIPDKFPEPCALKTLDLNSNQLQGPIPKSIANCTSLEVLDLGNNEVDDGFPFFLNIISTLRVLVLRRNKFHGPIACPRTSDFWDMLQIVDVAFNNFSGLLPAKCFKTWKAMMLDEDRVSKFSHIESEILTFDGIYYHDSVTLTVKGLQLEFVKVLNLVTSVDFSSNNFDGRIPEELMNFTGLYALNLSHNGLTGQIPSSIGNLKQLESLDLSSNYLGGEIPTQFERLNFLSYLNLSFNRLVGKIPVGRQLLTFDASSYVGNADLCGTPLKMCPDQRNSKSEVYTDSGAKFDWTFVSIGVGFGVGAGMVVAPLFFLERLKKWSNHIIDKALLVILPMLGLTWIPIHDDDDDDTEEETKKNNSDMEEDCDYNEMQNSLVHQRFRGRYCVLCSKLHISNKKVIHDPRCTCFPSPPISTSTYPDSYSSHSHS 1136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g02257 1136 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1-LIKE-RELATED 364 978 IPR046956 -
Phco3g02257 1136 FunFam Tyrosine-sulfated glycopeptide receptor 1 426 737 - -
Phco3g02257 1136 Coils Coil 33 53 - -
Phco3g02257 1136 ProSiteProfiles Leucine-rich repeat profile. 578 599 IPR001611 GO:0005515
Phco3g02257 1136 FunFam Tyrosine-sulfated glycopeptide receptor 1 738 986 - -
Phco3g02257 1136 Gene3D Ribonuclease Inhibitor 622 989 IPR032675 -
Phco3g02257 1136 SMART LRR_typ_2 103 126 IPR003591 -
Phco3g02257 1136 SMART LRR_typ_2 911 934 IPR003591 -
Phco3g02257 1136 SMART LRR_typ_2 235 258 IPR003591 -
Phco3g02257 1136 SMART LRR_typ_2 476 500 IPR003591 -
Phco3g02257 1136 SMART LRR_typ_2 529 552 IPR003591 -
Phco3g02257 1136 SMART LRR_typ_2 259 283 IPR003591 -
Phco3g02257 1136 SMART LRR_typ_2 331 355 IPR003591 -
Phco3g02257 1136 SMART LRR_typ_2 501 527 IPR003591 -
Phco3g02257 1136 SMART LRR_typ_2 403 427 IPR003591 -
Phco3g02257 1136 SMART LRR_typ_2 576 598 IPR003591 -
Phco3g02257 1136 SUPERFAMILY L domain-like 623 966 - -
Phco3g02257 1136 SUPERFAMILY L domain-like 520 616 - -
Phco3g02257 1136 SUPERFAMILY L domain-like 35 300 - -
Phco3g02257 1136 Gene3D Ribonuclease Inhibitor 32 201 IPR032675 -
Phco3g02257 1136 Gene3D Ribonuclease Inhibitor 202 305 IPR032675 -
Phco3g02257 1136 Pfam Leucine rich repeat N-terminal domain 34 75 IPR013210 -
Phco3g02257 1136 Gene3D Ribonuclease Inhibitor 376 621 IPR032675 -
Phco3g02257 1136 Pfam Leucine rich repeat 237 295 IPR001611 GO:0005515
Phco3g02257 1136 Pfam Leucine rich repeat 531 589 IPR001611 GO:0005515
Phco3g02257 1136 Pfam Leucine rich repeat 695 753 IPR001611 GO:0005515
Phco3g02257 1136 Pfam Leucine rich repeat 455 514 IPR001611 GO:0005515
Phco3g02257 1136 Pfam Leucine rich repeat 889 948 IPR001611 GO:0005515
Phco3g02257 1136 Gene3D Ribonuclease Inhibitor 306 375 IPR032675 -
Phco3g02257 1136 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 304 395 - -
Phco3g02257 1136 SUPERFAMILY L domain-like 220 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g02257 Phco-Chr3 48974306 48977716 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g01371 1 39184748 39187498 Phco3g02257 3 48974306 48977716 PCT