Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g02233 ATGGCTCTCAACAGCTCTTGCTCCAAGGCCATTCTAGGAACTCCTGTTCCTATGTCTGTTCCTAAGTCTGCTCCCAATGCTTCCAACACACCCAATTTTTTCTTCACCACCATTGACAGAAAGGGTTGCAACTTTGCCTTCCCAAAACTTGTTCAAAACCAGGGTCTTTTCCCACTTCATGCTGTGCCATCCGAAACTATGGTGGATTTGGACAATTTGGTGCATCAAACTGAACAACAACAACCAAAGGAACCAAAGATTATTAATCTGAAATTTCAGTTGCATTGCGATTGCTGTTTTGGGGAACAATTTATGGTAGTTGGTAATGATCCAACATTTGGCTCATGGAACCCTGCAAAAGCCATACCAATGACCTGGTCAGAAGGGCATGTGTGGAAAGCAGAGATGGCTGTACCTGTTGGAAAATACCAGTACAAAATCATCTTGAAAAGAAGAAATGGTGAGATTTTGTGGCAGCCAGGGCCAGACAGATTTGTTCAGACTTGGGAAGCTATGAACAGAATCACTGTTTCTGAGGATTGGGAAAATGCTAGACTTCAGAAAGTAACAGAGGATGAAGAAGTTTCCACCAAGAAATCAGAGGAAGAGAAAGTTGATCAGCCAAAGGATTCCCAGATGAAGTCAAAAACTTCCAATTTGGCTGAGAATTTGGATAGTGCAAAAGAGAACCAGAAATCCGATGCTTCAAAGGGGATGAAGAACATTCTTTAG 732 0.4221 MALNSSCSKAILGTPVPMSVPKSAPNASNTPNFFFTTIDRKGCNFAFPKLVQNQGLFPLHAVPSETMVDLDNLVHQTEQQQPKEPKIINLKFQLHCDCCFGEQFMVVGNDPTFGSWNPAKAIPMTWSEGHVWKAEMAVPVGKYQYKIILKRRNGEILWQPGPDRFVQTWEAMNRITVSEDWENARLQKVTEDEEVSTKKSEEEKVDQPKDSQMKSKTSNLAENLDSAKENQKSDASKGMKNIL 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g02233 243 Gene3D Immunoglobulins 83 182 IPR013783 -
Phco3g02233 243 PANTHER STARCH-BINDING DOMAIN-CONTAINING PROTEIN 1 82 235 - -
Phco3g02233 243 Pfam Starch binding domain 90 173 IPR002044 GO:2001070
Phco3g02233 243 MobiDBLite consensus disorder prediction 212 226 - -
Phco3g02233 243 ProSiteProfiles CBM20 (carbohydrate binding type-20) domain profile. 82 183 IPR002044 GO:2001070
Phco3g02233 243 SUPERFAMILY Starch-binding domain-like 85 177 IPR013784 GO:0030246
Phco3g02233 243 SMART CBM_20_2 87 178 IPR002044 GO:2001070
Phco3g02233 243 CDD CBM20 91 181 - -
Phco3g02233 243 MobiDBLite consensus disorder prediction 188 211 - -
Phco3g02233 243 MobiDBLite consensus disorder prediction 188 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g02233 Phco-Chr3 48690971 48692144 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g02233 3 48690971 48692144 Phco3g02233 3 48690971 48692144 ECH
Phco3g02233 3 48690971 48692144 Phco1g01266 1 22236444 22239580 PCT