Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g02226 ATGGGGTTTGGTGTGAAAAGGAGGAAGAAGGGAGGAGAAGCAGAGGGAGAAGGAAGGATGCGCAAGTCTTTCAAGGATTCACTCAAAGCTCTTGAAGCTGACATCCAGTTTGCCAACACACTAGCTTCTCAGTATCCAAGTGGCGGTGCCAGCTTCCAAATGAGATTGTCCTACAGCCCTGCTGCTCAGTTCTTCCTTTTCCTGGTTCAGTGGACTGACTGTCACCTTGCTGGAGCCTTAGGATTGCTCAGAATTCTAATATACAAGGCATATGAAGATGGGAAGACAACCATATCCATTTACGAAAGAAAAGCCAGTCTAAAGGAGTTCTATGGTATGGTGTTTCCCTCTTTATTGCAACTTCACAGAGGAATCACTGATGTTGAAGACCGAAAACAAAAACATCTATGTGCTACTAAGTATAAACTTAAAGATTTGACGAGCAAAGGAAAAGTTTCTGAAATTGACATCGAGAGGGAAGAAGAGTGTGGTATTTGCTTGGAGATGAATAGCATGGTTGTATTGCCCAACTGCTATCATTCAATGTGTATGAAATGCTACCAAGACTGGCACGCAAGATCTCAATCTTGTCCTTTCTGTCGAGACAGTCTCAAAAGAGTAAACTGTGATGATCTTTGGATCTACATTAGCAGCAGTGAGATTAATGACTTGGCTTCAATCAACAAGGAGAATTTGAAAAGATTATTCATATACATAGAAAGTTTGCCTCTAAATTCCAGATCCTATATTCACCATATATCATCACCACTAGTGATTGCCAATTAG 786 0.4109 MGFGVKRRKKGGEAEGEGRMRKSFKDSLKALEADIQFANTLASQYPSGGASFQMRLSYSPAAQFFLFLVQWTDCHLAGALGLLRILIYKAYEDGKTTISIYERKASLKEFYGMVFPSLLQLHRGITDVEDRKQKHLCATKYKLKDLTSKGKVSEIDIEREEECGICLEMNSMVVLPNCYHSMCMKCYQDWHARSQSCPFCRDSLKRVNCDDLWIYISSSEINDLASINKENLKRLFIYIESLPLNSRSYIHHISSPLVIAN 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g02226 261 FunFam RING/U-box superfamily protein 144 210 - -
Phco3g02226 261 ProSitePatterns Zinc finger RING-type signature. 178 187 IPR017907 -
Phco3g02226 261 MobiDBLite consensus disorder prediction 1 20 - -
Phco3g02226 261 Pfam Zinc finger, C3HC4 type (RING finger) 160 206 - -
Phco3g02226 261 SUPERFAMILY RING/U-box 152 205 - -
Phco3g02226 261 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 148 211 IPR013083 -
Phco3g02226 261 ProSiteProfiles Zinc finger RING-type profile. 163 201 IPR001841 -
Phco3g02226 261 PANTHER RING FINGER PROTEIN 41, 151 22 245 - -
Phco3g02226 261 SMART ring_2 163 200 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g02226 Phco-Chr3 48621970 48624959 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g02226 3 48621970 48624959 Phco3g02226 3 48621970 48624959 ECH
Phco3g02226 3 48621970 48624959 Phco1g01277 1 22717145 22720909 PCT