Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g01893 ATGGCTACCCAAAGAATAGGAAGGCAAAACAATCTCAGAGACCTTGTAGCATTAGCATCTTGCCATAAAATACAAAATCTAAAGCCTCTAACTCTGAGATCATCACTTCCAATTTCTATTGAATTTAAACATCAAACTGTACTTGTTTCCTCTAAATCTAATTCATTAATAGGTGTGGTGCATAAAACCTTTCTCTCTAAGCTTCCTTCTTGGTCTTTTCATTCTGTGGAGAGACTTGTTGGGTTCTCTCAGCTTTCACCTTTCCAGGCTCTGATCCAAAGAAAAATCTCAACTTTCTTCAGCAATTCATCTCTACCACTTCTGGGTATTCTTTTTCCCAAGCTCAGTAAAAAGCAGGAGATGGCTCAAAGTTCTCATGATCTAAAGTTTGGCAATGGGGAGAATGAAGAAAATGTCTCAGATACAGCTTATTCTGACAAAGCCCAGAAACCTGGTTCAAAGATGATTAATCCAAATGAGCCCAAGGAAAATTCATATCCAGTTTCTTCTGCTGATCGACCCCATTCAAAACCAAGAGTTCACTCAGAGGATCCATTTGGAAAGGGATCAGGAATAGGTTCTACTGACAACAGTAGAAAACCTTCAAGACAAACTATTGGATCGGAACGCAATTTTGACCGTTCACCCCTTCATCGCCAGGCAAAAACCCCTGGTAGAGATAGTCCTTCTTGGGAAGTAAAGAATTCATATGACACCAGCCATGGTACCCCAGGAAGGTCCCGGTTAAGACCATCTAACCGAGGTGATGAAACTCCTGATAAAGGTGCTGCTGTTCCAAAATTTGGTGACTGGGATGAGAGCAACCCTGCATCAGCTGATAACTACACTCATATTTTCAACCGAGTGCGGGAGGAGAAGCAGGTGGGGGCTGGACATGTGCCAGGCACACCTAATGCTAGACAATATGGTGTGCGGAATCATCCTGCTGATGAGAAAGCTCAGAGTTGCTGCTTTTACTGGGGCAAAAAATGA 993 0.425 MATQRIGRQNNLRDLVALASCHKIQNLKPLTLRSSLPISIEFKHQTVLVSSKSNSLIGVVHKTFLSKLPSWSFHSVERLVGFSQLSPFQALIQRKISTFFSNSSLPLLGILFPKLSKKQEMAQSSHDLKFGNGENEENVSDTAYSDKAQKPGSKMINPNEPKENSYPVSSADRPHSKPRVHSEDPFGKGSGIGSTDNSRKPSRQTIGSERNFDRSPLHRQAKTPGRDSPSWEVKNSYDTSHGTPGRSRLRPSNRGDETPDKGAAVPKFGDWDESNPASADNYTHIFNRVREEKQVGAGHVPGTPNARQYGVRNHPADEKAQSCCFYWGKK 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g01893 330 MobiDBLite consensus disorder prediction 229 247 - -
Phco3g01893 330 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 259 294 IPR008700 -
Phco3g01893 330 MobiDBLite consensus disorder prediction 293 315 - -
Phco3g01893 330 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 129 323 IPR040387 -
Phco3g01893 330 MobiDBLite consensus disorder prediction 191 211 - -
Phco3g01893 330 MobiDBLite consensus disorder prediction 123 276 - -
Phco3g01893 330 MobiDBLite consensus disorder prediction 250 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g01893 Phco-Chr3 43297873 43307066 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g01893 3 43297873 43307066 Phco1g01676 1 54764692 54770042 PCT