Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g01849 ATGTCCCTCAACCGCCTCCTCTACGCGGCCCGCCGGTCGGAGCGGCGGGCCTCCGCGCTCTCCTCCATCCGATCTCTCTCGGTGTCCCCCACCATAGCCCCCTCCGCTGCCTCCCCTCCCGCTCCTCCGCCACCCACCGCCATGATCTACGACCGCGCTGCCGAGTCCATCAAGTCCAAGCTCCGCAAGCTCCAGAACCCCGACCCCCGCTTCCTCAAATACGGCTCTCCCCGCCCCACGCTCTCCGACCATACGCACATTCTCGCCGCCCCTGAGACGCGCGTCACCACGCTCCCCAATGGCCTCCGCGTCGCCACCGAGTCCACCCTCGCCGCCCGCACGGCCACGGTCGGCGTCTGGATCGACGCAGGCTCGCGCTTCGAGACCGAGGAGACCAACGGCACCGCGCACTTCCTGGAGCACATGATCTTCAAGGGCACCGAGCGTCGCAACGCGCGTGAGCTTGAGGAAGAGATCGAGAACATGGGAGGACACCTCAACGCGTACACCTCACGCGAACAGACCACATATTATGCCAAGGTTACCGACAGCGATGTACCCCAGGCCCTCGACATCCTTGCCGACATCCTTCAGAATTCTCGATTTGAGGAAAATCGCATCAGCCGCGAACGTGATGTCATTCTCCGTGAAATGGAGGAGGTTGAGGGTCAAACTGAGGAAGTGATCTTTGATCACCTACACGCAACTGCGTTCCAGTACACTCCTCTTGGAAGAACCATTCTTGGACCTGATTGGAACATTAAGACAATCACCAAAGCTCATCTGCAGACCTACATTCAGACACATTACACGGCTCCTAGGATGGTGATAGCTGCATCTGGAGCTGTCAAGCATGAGGATATTGTTGATCAAGTGAACAAGTTGTTTACTAAGTTGTCGACAGATGGCACTACCACGGCTCAATTAGTTGCTAAAGGGCCATCTATTTTTACTGGTTCTGAGGTTAGAATGCTCGATGATGATATTCCCCTTGCACAATTTGCGGTGGCTTTTGAAGGTGCACCTTGGAAGGACCCAGATTCAGTTGCTCTCATGGTCATGCAAGCTATGTTGGGTTCTTGGAATAAGGCGGCTGGAGGTGGTAAACACATGGGTTCTGAGTTAGCACAACGAGTTGGTATTAATGAAGTTGCTGAGAGCATTATGGCTTTCAATACCAATTACAAGGACACAGGTCTTTTTGGTGTTTATGCTGTTGCTAAGCCTGATAGCTTGGATGATTTGTCATATGCAATAATGTATAACATAACCAAGTTGGCTTATCGCGTTTCTGAAGATGATGTTACACGTGCTTGTAATCAGTTGAAATCTTCGTTGCTACTACACATTGATGGAACAAGTCCAGTGGCTGAAGATATTGGCCGGCAGCTGCTTACCTATGGTAGGAGAATCCCGTTTGCTGAATTGTTTGCTAGAATTGATGCGGTTGATGCTAGTACAATTAGACGGGTTGCAAACAGGTTTTTCTATGACAAGGATGTAGCTATTGCTGCTGTGGGTCCTATTCAGCGTTTGCCCGACTACAATTGGTTCAGACGCAGAACCTACTGGAACAGATATTAG 1584 0.5221 MSLNRLLYAARRSERRASALSSIRSLSVSPTIAPSAASPPAPPPPTAMIYDRAAESIKSKLRKLQNPDPRFLKYGSPRPTLSDHTHILAAPETRVTTLPNGLRVATESTLAARTATVGVWIDAGSRFETEETNGTAHFLEHMIFKGTERRNARELEEEIENMGGHLNAYTSREQTTYYAKVTDSDVPQALDILADILQNSRFEENRISRERDVILREMEEVEGQTEEVIFDHLHATAFQYTPLGRTILGPDWNIKTITKAHLQTYIQTHYTAPRMVIAASGAVKHEDIVDQVNKLFTKLSTDGTTTAQLVAKGPSIFTGSEVRMLDDDIPLAQFAVAFEGAPWKDPDSVALMVMQAMLGSWNKAAGGGKHMGSELAQRVGINEVAESIMAFNTNYKDTGLFGVYAVAKPDSLDDLSYAIMYNITKLAYRVSEDDVTRACNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDAVDASTIRRVANRFFYDKDVAIAAVGPIQRLPDYNWFRRRTYWNRY 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g01849 527 FunFam Mitochondrial-processing peptidase subunit beta, mitochondrial 313 527 - -
Phco3g01849 527 MobiDBLite consensus disorder prediction 19 34 - -
Phco3g01849 527 MobiDBLite consensus disorder prediction 17 45 - -
Phco3g01849 527 SUPERFAMILY LuxS/MPP-like metallohydrolase 90 296 IPR011249 GO:0046872
Phco3g01849 527 Coils Coil 152 172 - -
Phco3g01849 527 PANTHER METALLOPROTEASE 89 513 - -
Phco3g01849 527 SUPERFAMILY LuxS/MPP-like metallohydrolase 321 517 IPR011249 GO:0046872
Phco3g01849 527 Pfam Peptidase M16 inactive domain 257 442 IPR007863 -
Phco3g01849 527 ProSitePatterns Insulinase family, zinc-binding region signature. 124 147 IPR001431 GO:0004222|GO:0006508
Phco3g01849 527 Gene3D - 80 306 - -
Phco3g01849 527 Gene3D - 309 527 - -
Phco3g01849 527 FunFam Mitochondrial-processing peptidase subunit beta 80 301 - -
Phco3g01849 527 Pfam Insulinase (Peptidase family M16) 103 251 IPR011765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g01849 Phco-Chr3 42455924 42461377 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g01849 3 42455924 42461377 Phco1g01724 1 55556152 55562369 PCT