Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g01724 ATGGCCACCAACCACCTTATCACCCTCACCCGCCGCCTCCGTCACCCCACATCCACCCGCCCCTTCTCAGCCGCCTCGACGATCTCTGCCCGCCCCGCCCCGCCCCCACCCAACGCAATGCTCTACGACCGCCTCGCCTCCGCCACCAGTGCCAAACTCCGCCGCCTCGACCATCCCGACCCCCGCTTCCTCAAGCACGGCAGCCCGGTGCCCTCCGACACCGACCACACGCGCTTCCTCGGCGCTCCCCAAACCCGCGTGACCACGCTCCCCTGCGGCCTTCGCGTCGCTTCCGAGTCCTCCCTCGCCGCACGCACTGCCACCGTCGGCGTTTGGATCGACGCCGGGTCACGGTTCGAGACCGAGGAAAGCAACGGCACCGCGCATTTCCTGGAACACATGATCTTCAAGGGCACCGCGAAGCGCACCGTGAGGGAGCTGGAGGAGGAGATCGAGAACATGGGAGGGCACCTGAATGCGTACACCTCACGCGAACAGACCACGTACTACGCTAAGGTGACGAACAAGGATGTTCCCAAGGCTCTTGATATTCTGGCTGATATCTTGCAGAATTCGAAGTTCGATGATAATAGGATCATCCGTGAGCGTGATGTGATTCTGAGGGAAATGGAGGAGGTTGAGGGACAAATGGAAGAAGTAATCTTTGACCATTTACATGCAACTGCTTTCCAGTACAGTCCACTTGGTAGAACAATTCTTGGACCTGCTCAGAATATCAAGACAATCACTAAAGATCATCTGCAAAACTACATTCAGACACACTACACAGCTCCTAGAATGGTGGTTGCCGCATCTGGAGCTGTCAAGCATGAAGAAATTGTAGAGCAAGTAAAAACGTTGTTTACTAAGTTGTCAACAGATCCCACCACAGCTTCTCAATTAGTTGCAAAAGAACCAGCCAACTTTACCGGTTCCGAGGTTAGAATTTTGGATGATGATATTCCCCTTGCACAATTTGCTGTAGCTTTTGAAGGTGCTGCATGGACAGATCCTGATTCCGTTGCTCTGATGGTCATGCAAGCTATGTTGGGTTCTTGGAATAAATCCACAGGAGGTGGAAAGCACATGGGTTCTGAGTTGGCGCAACGAGTTGGCATTAATGATGTTGCAGAAAGCATGATGGCCTTCAATACTAATTATAAGGATACAGGTCTCTTTGGTGTTTATGCTGTTGCTAAGAAGGATTGCTTGGATGACTTAAGCTATGCAATAATGTATGAGACAACCAAGTTGGCTTATAAGGTTTCAGAAGATGATGTTACTCGAGCTCGTAATCAGTTGAAATCTTCACTCCTGCTTCACATAGATGGAACAAGTCCAGTAGCTGAAGATATTGGGCGCCAGTTACTCACCTACAACAGAAGAATACCATTTGCAGAATTGTTTGCTAGAATTGATGCTGTGGATGCAAGCACAATAAAACGTGTTGCTAACCGATTTATTTATGACAAGGATATTGCAATTGCTGCTATGGGACCTATTCAACGTTTGCCTGATTACAACTGGTTCAGACGAAGAACCTACTGGAATCGATATTAG 1560 0.5013 MATNHLITLTRRLRHPTSTRPFSAASTISARPAPPPPNAMLYDRLASATSAKLRRLDHPDPRFLKHGSPVPSDTDHTRFLGAPQTRVTTLPCGLRVASESSLAARTATVGVWIDAGSRFETEESNGTAHFLEHMIFKGTAKRTVRELEEEIENMGGHLNAYTSREQTTYYAKVTNKDVPKALDILADILQNSKFDDNRIIRERDVILREMEEVEGQMEEVIFDHLHATAFQYSPLGRTILGPAQNIKTITKDHLQNYIQTHYTAPRMVVAASGAVKHEEIVEQVKTLFTKLSTDPTTASQLVAKEPANFTGSEVRILDDDIPLAQFAVAFEGAAWTDPDSVALMVMQAMLGSWNKSTGGGKHMGSELAQRVGINDVAESMMAFNTNYKDTGLFGVYAVAKKDCLDDLSYAIMYETTKLAYKVSEDDVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYNRRIPFAELFARIDAVDASTIKRVANRFIYDKDIAIAAMGPIQRLPDYNWFRRRTYWNRY 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g01724 519 FunFam Mitochondrial-processing peptidase subunit beta, mitochondrial 305 519 - -
Phco1g01724 519 MobiDBLite consensus disorder prediction 56 79 - -
Phco1g01724 519 Pfam Insulinase (Peptidase family M16) 95 242 IPR011765 -
Phco1g01724 519 Gene3D - 301 519 - -
Phco1g01724 519 Coils Coil 144 164 - -
Phco1g01724 519 Gene3D - 73 294 - -
Phco1g01724 519 ProSitePatterns Insulinase family, zinc-binding region signature. 116 139 IPR001431 GO:0004222|GO:0006508
Phco1g01724 519 MobiDBLite consensus disorder prediction 1 26 - -
Phco1g01724 519 MobiDBLite consensus disorder prediction 1 38 - -
Phco1g01724 519 FunFam Mitochondrial-processing peptidase subunit beta 72 293 - -
Phco1g01724 519 SUPERFAMILY LuxS/MPP-like metallohydrolase 311 509 IPR011249 GO:0046872
Phco1g01724 519 PANTHER METALLOPROTEASE 82 505 - -
Phco1g01724 519 MobiDBLite consensus disorder prediction 56 72 - -
Phco1g01724 519 Pfam Peptidase M16 inactive domain 249 434 IPR007863 -
Phco1g01724 519 SUPERFAMILY LuxS/MPP-like metallohydrolase 82 288 IPR011249 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g01724 Phco-Chr1 55556152 55562369 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g01849 3 42455924 42461377 Phco1g01724 1 55556152 55562369 PCT