Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00927 ATGAGCAAAAGCAACACTGCAATGAGCTTAAGAGGTGTAATCTTGTGGTGTGTTTGGTTGTGTTTGTTGCAAGTATCACTGGGAGCTGTGAGGCACTACAAGTTTGAAGTGAAGTACAGGTATGGTGAGCCAGATTGCGAAGAGAAAGTTGTGATGGGAATCAATGGTCAGTTTCCATGCCCAACCATAAGAGCAAAAGCTGGAGACACCCTTCATATTGCTGTCACCAATAAGCTTGTCACAGAGGGAACAGTTATTCACTGGCATGGAATTAGACAGTATGGAACGCCTTGGGCAGATGGAACTGCTTCCATTTCTCAGTGTGCTATAGCCCCCGGAGAAACTTTTCATTACAGATTCACAGTTGATAAGGCTGGTACATACTTCTACCATGGACACTATGGTATGCAGAGAACAGCAGGGTTGTATGGTTCTCTAATAGTGGATTTAGCAAAGGGAAAGAAAGAAGCATTTGATTATGATGGTGAATTCAACCTTCTTTTAAGTGATTGGTGGCACAAAAGCTCACATGAACAACAGGTTGCTCTCTCCTCCATTCCTTTCAGATGGATTAATGAACCTCAGTCTCTGCTTATCAATGGAAGAGGACAACACAATTGTTCCTTGGCAGCTAATGCTATGAACACCTCCTTGCCCCAATGTAAGTTCAGAGGCAATGAAGAATGTGCACCCCAGATTTTTCATGTTCATCCAAACAAGACCTACAGAATTAGAATTGCTAGTACAACTTCCTTAGCATCTCTCAACTTGGCCATTGGGAATCACAAATTGGTGGTGGTGGAAGCTGATGGAAACTATGTGAAACCATTTACTGTTGATGACATAGATATATATTCTGGTGAAACCTATTCGGTCCTCCTCACAACAAATCAAGATCCAAAGAAGAACTATTGGATTTCAGTTGGTGTTAGAGGAAGAAAACCTAACACCCCACAAGGGTTAACTATCCTAAACTACAAAACAATATCTGCTTCAATTTTCCCCACTTCTCCACCACCAATCACACCTCAATGGGATGATTACAATCATAGCAAGACATTCACACACAAAATTATTGCACGAAAGGGAACCAGAAAACCTCCTCAACACTATGATCGTAGGCTTCTCCTTCTTAATACACAAAACCTTGTTGATGGAAACACTAAATGGGCCATCAACAATGTCTCCTTAGTATTGCCATCAACTCCTTACCTAGGCTCTATTAAGTTTAATGTCAATGGTTCCTTTGGCACAAAAAGCCCCCCAAACACTTTCTCAGAGGATCATGACATCTACAACCCTCCCTTGAATCCTAATTCAAACATTGGTAGTGGGGTTTACATGTTCCAATTAAACCAAGTGGTAGATGTGATACTTCAAAATGCTAATGTAATGAAGGGGCAAAATAGTGAGATTCACCCTTGGCATTTGCATGGGCATGACTTTTGGGTTTTGGGGTATGGAGATGGGAAGTTTCAACAGGGTGATGAAAGAAAATTCAACTTGAAGAACCCACCATTGAGGAACACTGCAGTAATATTCCCATATGGATGGACTGCTTTGAGGTTCAAGGCAGATAATCCTGGAGTTTGGGCTTTTCATTGTCACATTGCGTCTCATTTGTACATGGGTATGGGTGTAATTTTTGCTGAGGGTGTTCTAAATGTTAAGAGAATACCTCGTGAAGCTGTAGCATGTGGTCTTCTCAAGAAGGTGCTAATAAATAAAAAACACAACTGA 1740 0.4126 MSKSNTAMSLRGVILWCVWLCLLQVSLGAVRHYKFEVKYRYGEPDCEEKVVMGINGQFPCPTIRAKAGDTLHIAVTNKLVTEGTVIHWHGIRQYGTPWADGTASISQCAIAPGETFHYRFTVDKAGTYFYHGHYGMQRTAGLYGSLIVDLAKGKKEAFDYDGEFNLLLSDWWHKSSHEQQVALSSIPFRWINEPQSLLINGRGQHNCSLAANAMNTSLPQCKFRGNEECAPQIFHVHPNKTYRIRIASTTSLASLNLAIGNHKLVVVEADGNYVKPFTVDDIDIYSGETYSVLLTTNQDPKKNYWISVGVRGRKPNTPQGLTILNYKTISASIFPTSPPPITPQWDDYNHSKTFTHKIIARKGTRKPPQHYDRRLLLLNTQNLVDGNTKWAINNVSLVLPSTPYLGSIKFNVNGSFGTKSPPNTFSEDHDIYNPPLNPNSNIGSGVYMFQLNQVVDVILQNANVMKGQNSEIHPWHLHGHDFWVLGYGDGKFQQGDERKFNLKNPPLRNTAVIFPYGWTALRFKADNPGVWAFHCHIASHLYMGMGVIFAEGVLNVKRIPREAVACGLLKKVLINKKHN 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00927 579 SUPERFAMILY Cupredoxins 368 566 IPR008972 -
Phco3g00927 579 SUPERFAMILY Cupredoxins 158 359 IPR008972 -
Phco3g00927 579 ProSitePatterns Multicopper oxidases signature 2. 534 545 IPR002355 GO:0005507
Phco3g00927 579 Gene3D - 365 579 IPR008972 -
Phco3g00927 579 Pfam Multicopper oxidase 442 552 IPR011706 GO:0005507|GO:0016491
Phco3g00927 579 SUPERFAMILY Cupredoxins 24 177 IPR008972 -
Phco3g00927 579 Pfam Multicopper oxidase 37 149 IPR011707 GO:0005507
Phco3g00927 579 Gene3D - 158 364 IPR008972 -
Phco3g00927 579 Gene3D - 24 149 IPR008972 -
Phco3g00927 579 CDD CuRO_3_AAO 372 560 IPR034267 GO:0005507
Phco3g00927 579 ProSitePatterns Multicopper oxidases signature 1. 529 549 IPR033138 -
Phco3g00927 579 FunFam L-ascorbate oxidase 365 577 - -
Phco3g00927 579 NCBIfam L-ascorbate oxidase 30 567 IPR017760 GO:0005507|GO:0005576
Phco3g00927 579 Pfam Multicopper oxidase 164 327 IPR001117 -
Phco3g00927 579 FunFam L-ascorbate oxidase 158 364 - -
Phco3g00927 579 PANTHER MULTI-COPPER OXIDASE 46 551 IPR045087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00927 Phco-Chr3 7757835 7762716 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g00927 3 7757835 7762716 Phco3g00927 3 7757835 7762716 ECH
Phco2g02247 2 53101963 53105198 Phco3g00927 3 7757835 7762716 ECH
Phco6g00491 6 4707821 4710643 Phco3g00927 3 7757835 7762716 ECH