Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00764 ATGAGAAACACTGAAGAACCCTCTCTTCAACACTCAACCAACGGCGATGCGGAACCTAACCACCACCACGATATTGAAGAGGATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATGACGAATACGACGAGGACGACGACGTCGTTCAGCAACCGAATCGCGGAATTCCCCAATCCGCATCGACCAAGCTGCGTGAGCAGCGTTTCAAGGTGGAAACCCTATCGCGGCGGTTGTCGTCGGAGCTGGTTCCGATCCGAGTGCACGACGTGGTCATAAACGGCAACACTAAGACCAAGGATTGGGTAATTGAAGCGGAGCTCAGAGGAGTAGAGAACGCCACCAGCATGCAGGAACTTATGCAAGTTTCGCAAATCGCCATTGCCAGGCTTCAGGAACTCGAAATCTTCGATTCCTGCAAGGTTCGCCTCGAGGCAGGGCCGCGAGAACTCCCAAACACTGCCAATGTCATCGTCGACGTTGTTGAAACCGGTAACAAAGTTTCAGCCAAATTCAACGTTTATAACAAACCCTCGACTAGTTCTTGGACTGCTGAAGGTGCTCTCAAGTATAAGAACTTTTTGGGCTATGGTGATTTATGGGATGCTTCTTTGGCCTATGGGGCCAACCAAGGGACTGAGGTGAGTGTCGGGGTGCATGCCCCTCGAGTTAGAGGGTTTTTAACTCCTATTGTGGCACGGCTATCCATGCTTTCCCAAGATTGGCAAGAGGCTTCCTCGTACAAAGATCAGTTACTGGGTGCTTCTCTTGGCTTGATCTCGACCGAGCACCATGACTTAGCATACACTCTTGGATGGCGTACCTTATCAGATCCATCACAGATGTCATCCAGGTCTATAAGAAGGCAGCTTGGTCATGGTTTAGTGTCTTCTTTGAAGTATACATTTAAAATTGATAGGAGAAATTCTCCCATCAGGCCAACAAAAGGATATGCTTTTCTTTCCTCCACACATGTTGGTGGCCTTACTCCAGATCCCAGGAGCTTGCGGTTTCTGCGCCAGGAGTTTGATGTTCGCTTTGCCGTCCCTTTTGGGTTTTACAATACAGCTCTAAACCTTGGGATATCTGCTGGTGCTGTTTTTCCATGGGGTCATGGATTCAAAACCAAGCCATCTCCCCTTCCAGAAAGGTTTTATTTGGGCGGTGATTTTTCTCCAGTTTGCACTCTAGGAGGGCCAACAACCTTATGGGGATTTAAAACTAGAGGATTAGGTCCTACTGAACCTCGGAGGGTAAATAGAGATGGATCTGATGATGACAACGTTGATTCCTCTGGATGGGACTTCATTGGCGGAGATCTTGCTGTTACTGCTTTTGCTGATCTCTCTTTTGATCTTCCAATTAGGTGGTTGAGAGAACATGGAATACATGGTCATGTTTTTGCTGGTTCTGGGAATGCTGCGAAATTATCTCAGAATGAATATAGGCACTTCTCTCCTCGGAAGTTCTTGGAATCCTTTCGAATGTCTGTGGGATGTGGATTTGTTATTCCTACTAGACTCTTCCGCCTAGAGGGTAACTACTTTTACATACTCAGAAAGGGTGAGCAAGATCGTGGGAAGACTGGATTTAGGTTTAGTTTCTCAGCTCCTTGGTAG 1617 0.4719 MRNTEEPSLQHSTNGDAEPNHHHDIEEDEEEEEEEEEEDDEYDEDDDVVQQPNRGIPQSASTKLREQRFKVETLSRRLSSELVPIRVHDVVINGNTKTKDWVIEAELRGVENATSMQELMQVSQIAIARLQELEIFDSCKVRLEAGPRELPNTANVIVDVVETGNKVSAKFNVYNKPSTSSWTAEGALKYKNFLGYGDLWDASLAYGANQGTEVSVGVHAPRVRGFLTPIVARLSMLSQDWQEASSYKDQLLGASLGLISTEHHDLAYTLGWRTLSDPSQMSSRSIRRQLGHGLVSSLKYTFKIDRRNSPIRPTKGYAFLSSTHVGGLTPDPRSLRFLRQEFDVRFAVPFGFYNTALNLGISAGAVFPWGHGFKTKPSPLPERFYLGGDFSPVCTLGGPTTLWGFKTRGLGPTEPRRVNRDGSDDDNVDSSGWDFIGGDLAVTAFADLSFDLPIRWLREHGIHGHVFAGSGNAAKLSQNEYRHFSPRKFLESFRMSVGCGFVIPTRLFRLEGNYFYILRKGEQDRGKTGFRFSFSAPW 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00764 538 PANTHER SORTING AND ASSEMBLY MACHINERY SAMM50 PROTEIN FAMILY MEMBER 11 535 IPR039910 -
Phco3g00764 538 MobiDBLite consensus disorder prediction 1 15 - -
Phco3g00764 538 MobiDBLite consensus disorder prediction 1 65 - -
Phco3g00764 538 Pfam Omp85 superfamily domain 192 535 IPR000184 GO:0019867
Phco3g00764 538 Coils Coil 25 45 - -
Phco3g00764 538 Gene3D membrane protein fhac: a member of the omp85/tpsb transporter family 174 537 - -
Phco3g00764 538 FunFam Outer membrane OMP85 family protein 84 163 - -
Phco3g00764 538 Gene3D membrane protein fhac 84 163 - -
Phco3g00764 538 MobiDBLite consensus disorder prediction 25 47 - -
Phco3g00764 538 FunFam Outer membrane OMP85 family protein 174 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00764 Phco-Chr3 6345812 6350579 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g00764 3 6345812 6350579 Phco3g00764 3 6345812 6350579 ECH
Phco2g02794 2 57366647 57370791 Phco3g00764 3 6345812 6350579 PCT